RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 SLC19A2O60779 497 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 SC5DO75845 299 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 FARS2O95363 451 aaKnown RBP12.62□□□□□ -0.39
COL9A1-207ENST00000486080 ANOS1P23352 680 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 HSD11B1P28845 292 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 MPGP29372 298 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 UGT2B10P36537 528 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 PRKXP51817 358 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 GALK2Q01415 458 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 TRAM1Q15629 374 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 RSPO1Q2MKA7 263 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-207ENST00000486080 NRN1LQ496H8 165 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 ELFN2Q5R3F8 820 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 RHOUQ7L0Q8 258 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 ALDH16A1Q8IZ83 802 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF676Q8N7Q3 588 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 KBTBD8Q8NFY9 601 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 OR10AC1Q8NH08 325 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 AKR7LQ8NHP1 331 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 KCTD7Q96MP8 289 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 DDX28Q9NUL7 540 aaKnown RBP12.62□□□□□ -0.39
COL9A1-207ENST00000486080 FAM206AQ9NX38 181 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 PLEK2Q9NYT0 353 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 OR52A1Q9UKL2 312 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF835Q9Y2P0 537 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 SHANK1Q9Y566 2161 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 A0A1W2PPK0 400 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 SHISA3A0PJX4 238 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF503-AS2A6NEH8 195 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 LOC110117498-PIK3R3F6TDL0 507 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 SGCEO43556 437 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 GPRIN2O60269 458 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 HLA-HP01893 362 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 MMP7P09237 267 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-207ENST00000486080 CLEC2LP0C7M8 214 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 TMIGD3P0DMS9 266 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-207ENST00000486080 GLI4P10075 376 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 RPS19P39019 145 aaKnown RBP12.62□□□□□ -0.39
COL9A1-207ENST00000486080 MMP16P51512 607 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 CCR9P51686 369 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 PSG4Q00888 419 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 HIKESHIQ53FT3 197 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 ABHD12BQ7Z5M8 362 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-207ENST00000486080 OR14A2Q96R54 314 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 COQ7Q99807 217 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 ATF6BQ99941 703 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 OR2H1Q9GZK4 316 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 WNT5BQ9H1J7 359 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 TP63Q9H3D4 680 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-207ENST00000486080 PLSCR4Q9NRQ2 329 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 SH3BGRL2Q9UJC5 107 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 TIMM10BQ9Y5J6 103 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 N6AMT1Q9Y5N5 214 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 PMF1-BGLAPU3KQ54 211 aa12.62□□□□□ -0.39
COL9A1-207ENST00000486080 KMT2BQ9UMN6 2715 aaPredicted RBP12.61□□□□□ -0.39
COL9A1-207ENST00000486080 TMEM212A6NML5 194 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 SYNGR3O43761 229 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 CDRT1O95170 752 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 CGAP01215 116 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 IL2RAP01589 272 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 HOXD4P09016 255 aaPredicted RBP12.61□□□□□ -0.39
COL9A1-207ENST00000486080 DBHP09172 617 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 SLC2A1P11166 492 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 GALP22466 123 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 IGHV1-2P23083 117 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 DCTDP32321 178 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 SDC2P34741 201 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 TIMP3P35625 211 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 PCBD1P61457 104 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 TUBA1BP68363 451 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 MXD1Q05195 221 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 RAB35Q15286 201 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF829Q3KNS6 432 aaPredicted RBP12.61□□□□□ -0.39
COL9A1-207ENST00000486080 ZMAT1Q5H9K5 638 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 Q6ZT83 130 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 TUBA1AQ71U36 451 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 NAA40Q86UY6 237 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 OR51A4Q8NGJ6 313 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 OR1K1Q8NGR3 316 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 BCL2L2Q92843 193 aaPredicted RBP12.61□□□□□ -0.39
COL9A1-207ENST00000486080 ORAI1Q96D31 301 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 OPN3Q9H1Y3 402 aaPredicted RBP12.61□□□□□ -0.39
COL9A1-207ENST00000486080 KCNN2Q9H2S1 579 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 GSTK1Q9Y2Q3 226 aa12.61□□□□□ -0.39
COL9A1-207ENST00000486080 SMIM30A4D0T7 59 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 F5H5K5 113 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 CALRP27797 417 aaKnown RBP12.6□□□□□ -0.39
COL9A1-207ENST00000486080 CEACAM8P31997 349 aaPredicted RBP12.6□□□□□ -0.39
COL9A1-207ENST00000486080 CX3CR1P49238 355 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF121P58317 390 aaPredicted RBP12.6□□□□□ -0.39
COL9A1-207ENST00000486080 PSMA6P60900 246 aaKnown RBP12.6□□□□□ -0.39
COL9A1-207ENST00000486080 GRB2P62993 217 aaKnown RBP12.6□□□□□ -0.39
COL9A1-207ENST00000486080 SCRN3Q0VDG4 424 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 YIF1BQ5BJH7 314 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 BCL2L15Q5TBC7 163 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 SYT9Q86SS6 491 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF283Q8N7M2 679 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF610Q8N9Z0 462 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 KCNJ15Q99712 375 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 PBOV1Q9GZY1 135 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms