RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 FBXW12Q6X9E4 464 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 ZNF620Q6ZNG0 422 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 TRPM8Q7Z2W7 1104 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 AQP12AQ8IXF9 295 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 LNX2Q8N448 690 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 LINC01356Q8N9X3 169 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 SLC26A10Q8NG04 563 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 OR5L1Q8NGL2 311 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 OR1F12Q8NHA8 337 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 SLC25A40Q8TBP6 338 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 YIPF5Q969M3 257 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 SAMD8Q96LT4 415 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 NMNAT3Q96T66 252 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 COQ7Q99807 217 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 BTBD10Q9BSF8 475 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 IFT27Q9BW83 186 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 C1QTNF5Q9BXJ0 243 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 BEX2Q9BXY8 128 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 HDHD2Q9H0R4 259 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 TPK1Q9H3S4 243 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 SRA1Q9HD15 236 aaKnown RBP5.96□□□□□ -1.46
VPS50-218ENST00000485994 EMC7Q9NPA0 242 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 ZNF275Q9NSD4 429 aaPredicted RBP5.96□□□□□ -1.46
VPS50-218ENST00000485994 PLEK2Q9NYT0 353 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 IL20RAQ9UHF4 553 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 CYB5R1Q9UHQ9 305 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 KCNS2Q9ULS6 477 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 FZR1Q9UM11 496 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 BAIAP2Q9UQB8 552 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 STARD10Q9Y365 291 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 CDH10Q9Y6N8 788 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 TANC2Q9HCD6 1990 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 CUBNO60494 3623 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 IGHV1-69-2A0A0G2JMI3 117 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 PLSCR5A0PG75 271 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 OR6C68A6NDL8 312 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 KIAA1324LA8MWY0 1029 aaPredicted RBP5.95□□□□□ -1.46
VPS50-218ENST00000485994 LYNX1G3V0Z9 82 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 IFNL4K9M1U5 179 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 SOCS2O14508 198 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 RER1O15258 196 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 DOK2O60496 412 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 NCR1O76036 304 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 UBOX5O94941 541 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 CCNB2O95067 398 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 MPZL1O95297 269 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 FSTL3O95633 263 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 ABHD16AO95870 558 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 IGHV1-46P01743 117 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 LYNX1P0DP58 116 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 ATP6V1B2P21281 511 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 PCMT1P22061 227 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 NOS3P29474 1203 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 OTX1P32242 354 aaPredicted RBP5.95□□□□□ -1.46
VPS50-218ENST00000485994 MAGEB1P43366 347 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 HTR5AP47898 357 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 DVL1P1P54792 670 aaPredicted RBP5.95□□□□□ -1.46
VPS50-218ENST00000485994 CCL8P80075 99 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 CARTPTQ16568 116 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 PCK2Q16822 640 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 HFEQ30201 348 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 TMEM255AQ5JRV8 349 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 TEX30Q5JUR7 227 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 SLC27A4Q6P1M0 643 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 LEG1Q6P5S2 330 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 RHOUQ7L0Q8 258 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 JAZF1Q86VZ6 243 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 PAPD5Q8NDF8 572 aaKnown RBP5.95□□□□□ -1.46
VPS50-218ENST00000485994 OR52L1Q8NGH7 329 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 OR4K13Q8NH42 304 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 CLDND2Q8NHS1 167 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 SPATA3Q8NHX4 192 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 ABHD4Q8TB40 342 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 FANK1Q8TC84 345 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 APOBEC3DQ96AK3 386 aaPredicted RBP5.95□□□□□ -1.46
VPS50-218ENST00000485994 SLC7A6OSQ96CW6 309 aaPredicted RBP5.95□□□□□ -1.46
VPS50-218ENST00000485994 ELMOD3Q96FG2 381 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 TSSK2Q96PF2 358 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 SOX7Q9BT81 388 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 CHID1Q9BWS9 393 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 NMNAT2Q9BZQ4 307 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 EGLN1Q9GZT9 426 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 SHARPINQ9H0F6 387 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 DECR2Q9NUI1 292 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 ASH2LQ9UBL3 628 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 IL19Q9UHD0 177 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 PURGQ9UJV8 347 aaKnown RBP5.95□□□□□ -1.46
VPS50-218ENST00000485994 LHFPL6Q9Y693 200 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 V9GYQ6 96 aa5.95□□□□□ -1.46
VPS50-218ENST00000485994 DNHD1Q96M86 4753 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 LRP5LA4QPB2 252 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 SURF4O15260 269 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 CST1P01037 141 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 TNFRSF1AP19438 455 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 HNF1AP20823 631 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 IGFBP5P24593 272 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 GGT2P36268 569 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 BLVRAP53004 296 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 SLC25A1P53007 311 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms