RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 SMPD2O60906 423 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 NGFP01138 241 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 SBK2P0C263 348 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 ALOX5APP20292 161 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 ERVS71-1P61550 626 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 SMN1Q16637 294 aaKnown RBP13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 MEDAGQ5VYS4 303 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 USP51Q70EK9 711 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 NAA40Q86UY6 237 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 RFLNBQ8N5W9 214 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 ZNF611Q8N823 705 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 NUP37Q8NFH4 326 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 RFKQ969G6 155 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 FBXW5Q969U6 566 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 RNFT2Q96EX2 444 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 C4orf45Q96LM5 186 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 LURAP1Q96LR2 239 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 DHRS9Q9BPW9 319 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 TTTY10Q9BZA0 68 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 YIPF3Q9GZM5 350 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 AMBNQ9NP70 447 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 DDX28Q9NUL7 540 aaKnown RBP13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 CLN6Q9NWW5 311 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 GRIP1Q9Y3R0 1128 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 TEX15Q9BXT5 2789 aa13.35□□□□□ -0.27
RPUSD3-217ENST00000485705 SOD3P08294 240 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 DANCRP0C864 163 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 ANOS1P23352 680 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 PCSK6P29122 969 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 VHLP40337 213 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 MTNR1AP48039 350 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 FABP6P51161 128 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 UCP2P55851 309 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 TMED1Q13445 227 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 IL18R1Q13478 541 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 RFPL4BQ6ZWI9 263 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 SLC35F2Q8IXU6 374 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 ZNF454Q8N9F8 522 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 TMEM171Q8WVE6 324 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 RNF133Q8WVZ7 376 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 TBX5Q99593 518 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 POFUT1Q9H488 388 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 ATPIF1Q9UII2 106 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 LAMP5Q9UJQ1 280 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 FZR1Q9UM11 496 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 SPEF1Q9Y4P9 236 aa13.34□□□□□ -0.27
RPUSD3-217ENST00000485705 PDZD2O15018 2839 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 ZNF878C9JN71 531 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 PSMD9O00233 223 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 ABHD16AO95870 558 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 LYNP07948 512 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 OR4A8P0C604 315 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 ACSM4P0C7M7 580 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 DBTP11182 482 aaKnown RBP13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 GLRXP35754 106 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 PRKXP51817 358 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 ZNF91Q05481 1191 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 ECH1Q13011 328 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 TAF13Q15543 124 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 ADIPOQQ15848 244 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 SPATA46Q5T0L3 261 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 LAIR2Q6ISS4 152 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 LRRN1Q6UXK5 716 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 SSX6Q7RTT6 188 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 C8orf59Q8N0T1 100 aaPredicted RBP13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 SETD9Q8NE22 299 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 ABHD4Q8TB40 342 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 LGALS12Q96DT0 336 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 Q96MT0 163 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 COPS4Q9BT78 406 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 ZNF442Q9H7R0 627 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 SLCO1C1Q9NYB5 712 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 EIF3KQ9UBQ5 218 aaKnown RBP13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 PLEKHA6Q9Y2H5 1048 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 CSMD1Q96PZ7 3565 aa13.33□□□□□ -0.28
RPUSD3-217ENST00000485705 C5orf63A6NC05 138 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 MAGEB4O15481 346 aaPredicted RBP13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 CD8AP01732 235 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 LCKP06239 509 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 APOBEC3AP31941 199 aaPredicted RBP13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 OTX1P32242 354 aaPredicted RBP13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 TTKP33981 857 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 ATP6V1E1P36543 226 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 OPRL1P41146 370 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 RAD52P43351 418 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 CXCR4P61073 352 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 PPP1CBP62140 327 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 CDK5R2Q13319 367 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 PAMR1Q6UXH9 720 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 LRP11Q86VZ4 500 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 OR1J1Q8NGS3 322 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 SLC25A40Q8TBP6 338 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 KCNJ15Q99712 375 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 STARD10Q9Y365 291 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 HSPE1-MOB4S4R3N1 261 aa13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 CHD3Q12873 2000 aaKnown RBP13.32□□□□□ -0.28
RPUSD3-217ENST00000485705 A0A1W2PQL4 384 aaPredicted RBP13.31□□□□□ -0.28
RPUSD3-217ENST00000485705 TMEM129A0AVI4 362 aa13.31□□□□□ -0.28
RPUSD3-217ENST00000485705 J3QRE1 110 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms