RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 TRGV11A0A075B6L2 103 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 A0A096LPI6 279 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 RNF103-CHMP3A0A140T963 221 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 LOC102725191A0A1B0GVB3 256 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 MEIOCA2RUB1 952 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 SLC28A1O00337 649 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 SURF4O15260 269 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 CD1AP06126 327 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 GUSBP08236 651 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 PRG2P13727 222 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 PRPH2P23942 346 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 GNALP38405 381 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 MAGEA4P43358 317 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 MAGEA12P43365 314 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 NPY4RP50391 375 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 ANXA11P50995 505 aaKnown RBP4.31□□□□□ -1.72
PTPN4-210ENST00000485247 DLX1P56177 255 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 PPP1CBP62140 327 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 EGR4Q05215 589 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 GALNTL6Q49A17 601 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 PABPC1L2AQ5JQF8 200 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 UNQ6126/PRO20091Q6UXV3 157 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 DCDC5Q6ZRR9 648 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 ZCCHC23Q6ZST2 131 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 ZER1Q7Z7L7 766 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 MOGAT3Q86VF5 341 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 PNKDQ8N490 385 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 CCNYL1Q8N7R7 359 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 ATG16L2Q8NAA4 619 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 OR2T11Q8NH01 316 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 C8orf46Q8TAG6 207 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 TAAR8Q969N4 342 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 POM121L2Q96KW2 1035 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 FCRL1Q96LA6 429 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 MAGEB18Q96M61 343 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 DDOQ99489 341 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 SSX3Q99909 188 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 DUSP26Q9BV47 211 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 NPFFR1Q9GZQ6 430 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 DPH5Q9H2P9 285 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 MMADHCQ9H3L0 296 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-210ENST00000485247 RANBP3Q9H6Z4 567 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-210ENST00000485247 SERTAD4Q9NUC0 356 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 TMEM216Q9P0N5 145 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 ERVK-18Q9QC07 812 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 CTSZQ9UBR2 303 aa4.31□□□□□ -1.72
PTPN4-210ENST00000485247 LOC100509620A0A075B734 347 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 LRRC30A6NM36 301 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 H0YHG0 523 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 IFNL4K9M1U5 179 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 NPFFO15130 113 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 OR2T1O43869 369 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 CHST1O43916 411 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 OR10H3O60404 316 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 ENTPD5O75356 428 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 CLIC3O95833 236 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 AGR2O95994 175 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 IGLV2-14P01704 120 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 MMP7P09237 267 aaPredicted RBP4.3□□□□□ -1.72
PTPN4-210ENST00000485247 LINC00032P0C843 101 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 AHCYP23526 432 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 EEF1B2P24534 225 aaKnown RBP4.3□□□□□ -1.72
PTPN4-210ENST00000485247 ATP5F1P24539 256 aaPredicted RBP4.3□□□□□ -1.72
PTPN4-210ENST00000485247 ARRB2P32121 409 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 SAA4P35542 130 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 PSMB10P40306 273 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 GDI2P50395 445 aaKnown RBP4.3□□□□□ -1.72
PTPN4-210ENST00000485247 PRKAA2P54646 552 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 BIDP55957 195 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 HOXA4Q00056 320 aaPredicted RBP4.3□□□□□ -1.72
PTPN4-210ENST00000485247 CALCOCO2Q13137 446 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 GNA13Q14344 377 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 PTGR1Q14914 329 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 TAF11Q15544 211 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 SYPL1Q16563 259 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 PGS1Q32NB8 556 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 CDONQ4KMG0 1287 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 FAM69AQ5T7M9 428 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 UNQ9370/PRO34162Q6UXP9 181 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 CCDC121Q6ZUS5 278 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 BTN2A1Q7KYR7 527 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 DPPA2Q7Z7J5 298 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 SLC22A9Q8IVM8 553 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 ZNF440Q8IYI8 595 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 CLECL1Q8IZS7 167 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 OR5AS1Q8N127 324 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 KRTCAP2Q8N6L1 136 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 ANKFN1Q8N957 763 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 SPC24Q8NBT2 197 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 ZBTB34Q8NCN2 500 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 OR10AD1Q8NGE0 317 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 AKR7LQ8NHP1 331 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 SLC7A13Q8TCU3 470 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 MIPOL1Q8TD10 442 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 WIPF2Q8TF74 440 aaPredicted RBP4.3□□□□□ -1.72
PTPN4-210ENST00000485247 NPRL2Q8WTW4 380 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 C17orf50Q8WW18 174 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 DDB2Q92466 427 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 RORBQ92753 470 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms