RNA–Protein interactions for RNA: ENST00000484958.5

FXR1-219, Transcript of FMR1 autosomal homolog 1, human

TSL 3

Gene FXR1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-219	ENST00000484958	NYAP2	Q9P242	653 aa		4.54	□□□□□ -1.68
FXR1-219	ENST00000484958	COPZ2	Q9P299	210 aa		4.54	□□□□□ -1.68
FXR1-219	ENST00000484958	CTSF	Q9UBX1	484 aa		4.54	□□□□□ -1.68
FXR1-219	ENST00000484958	CIT	O14578	2027 aa		4.54	□□□□□ -1.68
FXR1-219	ENST00000484958	COL5A3	P25940	1745 aa	Predicted RBP	4.54	□□□□□ -1.68
FXR1-219	ENST00000484958	MIA3	Q5JRA6	1907 aa		4.54	□□□□□ -1.68
FXR1-219	ENST00000484958		A0A1B0GVY2	172 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	FAM240B	A0A1B0GVZ2	78 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	FAM220BP	B1ANY3	271 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	INMT-MINDY4	F8WBC2	141 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958		M0R233	179 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	DFFA	O00273	331 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	PHOX2A	O14813	284 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	AZIN1	O14977	448 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	FABP7	O15540	132 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	LYRM1	O43325	122 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	EIF1B	O60739	113 aa	Known RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	TSC22D2	O75157	780 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	CXCL14	O95715	111 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	THY1	P04216	161 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	S100A9	P06702	114 aa	Known RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	TSPAN19	P0C672	248 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	PIP	P12273	146 aa	Predicted RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	GNS	P15586	552 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	CALCR	P30988	508 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	HOXA6	P31267	233 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	EIF1	P41567	113 aa	Known RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	CCL11	P51671	97 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	POLR2J	P52435	117 aa	Known RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	RAB4B	P61018	213 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	ERVK-8	P63133	956 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	CRADD	P78560	199 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	HOXC5	Q00444	222 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	PUDP	Q08623	228 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	CD226	Q15762	336 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	ZNF678	Q5SXM1	525 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	CELF3	Q5SZQ8	465 aa	Known RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	HACD4	Q5VWC8	232 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	FAHD1	Q6P587	224 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	ATRAID	Q6UW56	229 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	C5orf46	Q6UWT4	87 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	PAMR1	Q6UXH9	720 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	DPY19L2P2	Q6ZN68	376 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	FAM92B	Q6ZTR7	304 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	PGAP1	Q75T13	922 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	TAF8	Q7Z7C8	310 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	YRDC	Q86U90	279 aa	Known RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	IFNE	Q86WN2	208 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	PSTK	Q8IV42	348 aa	Known RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	STPG2	Q8N412	459 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	TTC29	Q8NA56	475 aa	Predicted RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	C19orf18	Q8NEA5	215 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	GMCL1P1	Q8NEA9	526 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	OR4F6	Q8NGB9	312 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	OR8D4	Q8NGM9	314 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	OR2T4	Q8NH00	348 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	PHOSPHO2	Q8TCD6	241 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	TWIST2	Q8WVJ9	160 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	APH1B	Q8WW43	257 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	UPRT	Q96BW1	309 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	SENP8	Q96LD8	212 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	ERMAP	Q96PL5	475 aa	Predicted RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	OR2M2	Q96R28	347 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	CDCA4	Q9BXL8	241 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	MED28	Q9H204	178 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	OR51M1	Q9H341	326 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	ANKRA2	Q9H9E1	313 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	CISH	Q9NSE2	258 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	CENPM	Q9NSP4	180 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	IMP3	Q9NV31	184 aa	Known RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	PRR34	Q9NV39	138 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	EXD2	Q9NVH0	621 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	DHRS4-AS1	Q9P1J3	65 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	SPAST	Q9UBP0	616 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	LHX3	Q9UBR4	397 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	FIS1	Q9Y3D6	152 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	AP1M2	Q9Y6Q5	423 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958		V9GYQ6	96 aa		4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	MYO18A	Q92614	2054 aa	Known RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	ZNF638	Q14966	1978 aa	Known RBP	4.53	□□□□□ -1.68
FXR1-219	ENST00000484958	ANKRD36	A6QL64	1941 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	ANK1	P16157	1881 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	PARP14	Q460N5	1801 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	MEIKIN	A0A087WXM9	373 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958		A0A1B0GTQ1	180 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	FABP12	A6NFH5	140 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	ARGFX	A6NJG6	315 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	NPIPA2	E9PIF3	369 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	SGCE	O43556	437 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	SCN2B	O60939	215 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	OR4F21	O95013	312 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	MPC2	O95563	127 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	DHFR	P00374	187 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	SERPINA1	P01009	418 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	IL6	P05231	212 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	HBQ1	P09105	142 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	FBP1	P09467	338 aa		4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	HOXB8	P17481	243 aa	Predicted RBP	4.52	□□□□□ -1.69
FXR1-219	ENST00000484958	SPI1	P17947	270 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 256.3 ms