RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 C3orf56Q8N813 242 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 OR8G5Q8NG78 346 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 GPA33Q99795 319 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 NUAK2Q9H093 628 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 SYT4Q9H2B2 425 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 DCAF13Q9NV06 445 aaKnown RBP9.64□□□□□ -0.87
SCFD1-206ENST00000484733 ASH2LQ9UBL3 628 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 NUP50Q9UKX7 468 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 LRCH1Q9Y2L9 728 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 AUP1Q9Y679 476 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 RGS9O75916 674 aaPredicted RBP9.64□□□□□ -0.87
SCFD1-206ENST00000484733 CDKN2AP42771 156 aaKnown RBP9.64□□□□□ -0.87
SCFD1-206ENST00000484733 PSME3P61289 254 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 ZMYND11Q15326 602 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 KRTAP27-1Q3LI81 207 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 PTCHD4Q6ZW05 846 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 GJC3Q8NFK1 279 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 OR13G1Q8NGZ3 307 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 APOBEC3DQ96AK3 386 aaPredicted RBP9.64□□□□□ -0.87
SCFD1-206ENST00000484733 OR2V2Q96R30 315 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 HDHD2Q9H0R4 259 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 GCM1Q9NP62 436 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 MMP26Q9NRE1 261 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 AURKCQ9UQB9 309 aa9.64□□□□□ -0.87
SCFD1-206ENST00000484733 WNT2P09544 360 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 PPIAL4GP0DN37 164 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 NCK1P16333 377 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 PRDX6P30041 224 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 ERFP50548 548 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 SMIM11AP58511 58 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 PAX8Q06710 450 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 GLYATQ6IB77 296 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 SMARCD3Q6STE5 483 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 COLCA1Q6ZS62 124 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 SLC7A6Q92536 515 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 MEGF10Q96KG7 1140 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 ZNF446Q9NWS9 450 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 IL20RAQ9UHF4 553 aa9.63□□□□□ -0.87
SCFD1-206ENST00000484733 SAMD4AQ9UPU9 718 aaKnown RBP9.63□□□□□ -0.87
SCFD1-206ENST00000484733 IGLV1-36A0A0B4J1U3 117 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 TRBV4-1A0A0J9YWV2 114 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 IQCF6A8MYZ5 107 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 SOCS2O14508 198 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 ARPC3O15145 178 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 RER1O15258 196 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 HKR1P10072 659 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 SELEP16581 610 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 EGR1P18146 543 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 MDH1P40925 334 aaKnown RBP9.62□□□□□ -0.87
SCFD1-206ENST00000484733 SRP9P49458 86 aaKnown RBP9.62□□□□□ -0.87
SCFD1-206ENST00000484733 NUDT2P50583 147 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 MMP16P51512 607 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 COX10Q12887 443 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 SEC23BQ15437 767 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 AWAT1Q58HT5 328 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 ARMCX4Q5H9R4 360 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 FGD3Q5JSP0 725 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 KLF17Q5JT82 389 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-206ENST00000484733 CMTM5Q96DZ9 223 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 SLC30A2Q9BRI3 323 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 MRI1Q9BV20 369 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 MYLK2Q9H1R3 596 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 GORASP2Q9H8Y8 452 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 DDX28Q9NUL7 540 aaKnown RBP9.62□□□□□ -0.87
SCFD1-206ENST00000484733 PTTG3PQ9NZH4 202 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 B9D1Q9UPM9 204 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 LHFPL6Q9Y693 200 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 ARHGAP32A7KAX9 2087 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 SPRY1O43609 319 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-206ENST00000484733 SEMG1P04279 462 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 DBHP09172 617 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 PAX2Q02962 417 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 KRT72Q14CN4 511 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 RSPO1Q2MKA7 263 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-206ENST00000484733 RFX4Q33E94 735 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 SLC36A3Q495N2 470 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 ESCO2Q56NI9 601 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 RBMS3Q6XE24 437 aaKnown RBP9.62□□□□□ -0.87
SCFD1-206ENST00000484733 ZNF771Q7L3S4 317 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-206ENST00000484733 ATG16L2Q8NAA4 619 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 ZNF582Q96NG8 517 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-206ENST00000484733 ZNF747Q9BV97 191 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 C1QTNF5Q9BXJ0 243 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 TMEM165Q9HC07 324 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 MIOXQ9UGB7 285 aa9.62□□□□□ -0.87
SCFD1-206ENST00000484733 CEACAM18A8MTB9 384 aa9.61□□□□□ -0.87
SCFD1-206ENST00000484733 IDH3BO43837 385 aa9.61□□□□□ -0.87
SCFD1-206ENST00000484733 SLC6A6P31641 620 aa9.61□□□□□ -0.87
SCFD1-206ENST00000484733 SEC61A1P61619 476 aaKnown RBP9.61□□□□□ -0.87
SCFD1-206ENST00000484733 FOXL1Q12952 345 aa9.61□□□□□ -0.87
SCFD1-206ENST00000484733 ECH1Q13011 328 aa9.61□□□□□ -0.87
SCFD1-206ENST00000484733 HNRNPA0Q13151 305 aaKnown RBP9.61□□□□□ -0.87
SCFD1-206ENST00000484733 HLXQ14774 488 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-206ENST00000484733 OR2T2Q6IF00 324 aa9.61□□□□□ -0.87
SCFD1-206ENST00000484733 C1orf94Q6P1W5 598 aa9.61□□□□□ -0.87
SCFD1-206ENST00000484733 C9orf139Q6ZV77 190 aa9.61□□□□□ -0.87
SCFD1-206ENST00000484733 CELF2-AS1Q8N7Q2 184 aa9.61□□□□□ -0.87
SCFD1-206ENST00000484733 SIGLECL1Q8N7X8 197 aa9.61□□□□□ -0.87
SCFD1-206ENST00000484733 RERGLQ9H628 205 aa9.61□□□□□ -0.87
SCFD1-206ENST00000484733 SPAG4Q9NPE6 437 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms