RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 HLA-DOBP13765 273 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 COX6B1P14854 86 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 POU3F2P20265 443 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-216ENST00000484087 ALOX5APP20292 161 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 MAPK3P27361 379 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-216ENST00000484087 ETV6P41212 452 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 GUCA1AP43080 201 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-216ENST00000484087 BIDP55957 195 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 DEFA1P59665 94 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 DEFA3P59666 94 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 RAC1P63000 192 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 PPP3R1P63098 170 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 ADAM8P78325 824 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 RASGEF1BQ0VAM2 473 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF239Q16600 458 aaKnown RBP6.12□□□□□ -1.43
BRCA1-216ENST00000484087 YIF1BQ5BJH7 314 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 THEM4Q5T1C6 240 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 PDSS1Q5T2R2 415 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 TMEM211Q6ICI0 200 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 VWA1Q6PCB0 445 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 TMEM91Q6ZNR0 172 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 KRT77Q7Z794 578 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 LUZP2Q86TE4 346 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 GGNQ86UU5 652 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 MFSD4AQ8N468 514 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 SYT14Q8NB59 555 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 OTOSQ8NHW6 89 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 NSMAFQ92636 917 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 INTS12Q96CB8 462 aaKnown RBP6.12□□□□□ -1.43
BRCA1-216ENST00000484087 SLC25A44Q96H78 314 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-216ENST00000484087 WDFY2Q96P53 400 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 CCDC32Q9BV29 185 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 SLITRK2Q9H156 845 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 KLHL9Q9P2J3 617 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 CLCF1Q9UBD9 225 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 DAPK2Q9UIK4 370 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 ST6GALNAC2Q9UJ37 374 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 COA3Q9Y2R0 106 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF281Q9Y2X9 895 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 MRPS18CQ9Y3D5 142 aaKnown RBP6.12□□□□□ -1.43
BRCA1-216ENST00000484087 GRIP1Q9Y3R0 1128 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 KLF2Q9Y5W3 355 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-216ENST00000484087 SIRT4Q9Y6E7 314 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-216ENST00000484087 IGLV1-36A0A0B4J1U3 117 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 IGHV3-15A0A0B4J1V0 119 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 MBD3L4A6NDZ8 208 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-216ENST00000484087 MBD3L3A6NE82 208 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-216ENST00000484087 MBD3L5A6NJ08 208 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-216ENST00000484087 AQP7P3A6NL99 342 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 TMEM212A6NML5 194 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 PSMD9O00233 223 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 CTDSP2O14595 271 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 PDCD5O14737 125 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 TNFSF11O14788 317 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 EFNA2O43921 213 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 TMEM127O75204 238 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 UPK1BO75841 260 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 AQP8O94778 261 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 RPP14O95059 124 aaKnown RBP6.11□□□□□ -1.43
BRCA1-216ENST00000484087 ACTL6AO96019 429 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 HRGP04196 525 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 CLEC2LP0C7M8 214 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 OCM2P0CE71 109 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 OCMP0CE72 109 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-216ENST00000484087 OR8G3PP0DMU2 310 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 GABRA1P14867 456 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 CTLA4P16410 223 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 ATF4P18848 351 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-216ENST00000484087 RAB3BP20337 219 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 PSMB10P40306 273 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 RIDAP52758 137 aaKnown RBP6.11□□□□□ -1.43
BRCA1-216ENST00000484087 DBPQ10586 325 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-216ENST00000484087 ALKBH1Q13686 389 aaKnown RBP6.11□□□□□ -1.43
BRCA1-216ENST00000484087 EIF2B1Q14232 305 aaKnown RBP6.11□□□□□ -1.43
BRCA1-216ENST00000484087 TRIM16LQ309B1 348 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 HSD17B12Q53GQ0 312 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 ZMAT1Q5H9K5 638 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 RIPPLY2Q5TAB7 128 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 LIPNQ5VXI9 398 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 NSUN5P2Q63ZY6 315 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 LYPD4Q6UWN0 246 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 ESPNLQ6ZVH7 1005 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-216ENST00000484087 GLB1L2Q8IW92 636 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF679Q8IYX0 411 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 RFLNBQ8N5W9 214 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 PARP16Q8N5Y8 322 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF676Q8N7Q3 588 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 OR6X1Q8NH79 312 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 OR5AK2Q8NH90 309 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 LILRB4Q8NHJ6 448 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 MBD3L2Q8NHZ7 208 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-216ENST00000484087 FNDC9Q8TBE3 224 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 ASB5Q8WWX0 329 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 DIRAS2Q96HU8 199 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 PGLYRP3Q96LB9 341 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 OR8B4Q96RC9 309 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 BARHL1Q9BZE3 327 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 TIGARQ9NQ88 270 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 MED29Q9NX70 200 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms