RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 SPRY3O43610 288 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 CDC14BO60729 498 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 CST1P01037 141 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 TGFAP01135 160 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 IFNA2P01563 188 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 CRYBB2P43320 205 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 MMP15P51511 669 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 COX10Q12887 443 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 TRIP10Q15642 601 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 ADGRG5Q8IZF4 528 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 PROKR2Q8NFJ6 384 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 OR10G2Q8NGC3 310 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 OR5L1Q8NGL2 311 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 OR2AJ1Q8NGZ0 328 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 OR2T4Q8NH00 348 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 SLC7A6Q92536 515 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 GTF3AQ92664 365 aaKnown RBP11.83□□□□□ -0.52
VARS-225ENST00000482996 ELMOD3Q96FG2 381 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 TSSK6Q9BXA6 273 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 PLA2G12AQ9BZM1 189 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 SHARPINQ9H0F6 387 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 FN3KQ9H479 309 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 KCNG2Q9UJ96 466 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 ZDHHC8Q9ULC8 765 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 BAIAP2Q9UQB8 552 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 ZSCAN5BA6NJL1 495 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 RP2O75695 350 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 IFNGP01579 166 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 IGHV1-46P01743 117 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 TFP02787 698 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 ADH4P08319 380 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 ZNF823P16415 610 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 HNF1AP20823 631 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 HIST1H3AP68431 136 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 ECH1Q13011 328 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 PSG7Q13046 419 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 CCNIQ14094 377 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 FLOT2Q14254 428 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 HFEQ30201 348 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 HIST2H3PS2Q5TEC6 136 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 CORO6Q6QEF8 472 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 USP51Q70EK9 711 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 HIST2H3AQ71DI3 136 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 SPATA24Q86W54 205 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 LNX2Q8N448 690 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 LINC01356Q8N9X3 169 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 CYB561A3Q8NBI2 242 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 OR2T33Q8NG76 320 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 OR8D4Q8NGM9 314 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 GIPC3Q8TF64 312 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 CANT1Q8WVQ1 401 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 PTP4A1Q93096 173 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 PITX2Q99697 317 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 CADM1Q9BY67 442 aaKnown RBP11.82□□□□□ -0.52
VARS-225ENST00000482996 YY1AP1Q9H869 796 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 KLHL21Q9UJP4 597 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 PURGQ9UJV8 347 aaKnown RBP11.82□□□□□ -0.52
VARS-225ENST00000482996 STARD10Q9Y365 291 aa11.82□□□□□ -0.52
VARS-225ENST00000482996 CLDN25C9JDP6 229 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 SOX14O95416 240 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 DBHP09172 617 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 FAM157CP0CG43 387 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 RAC2P15153 192 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 KITLGP21583 273 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 TNFSF4P23510 183 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 IL2RGP31785 369 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 PYCR1P32322 319 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 SLC3A1Q07837 685 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 TMEM255AQ5JRV8 349 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 C1orf146Q5VVC0 180 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 SLC18B1Q6NT16 456 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 CD300LDQ6UXZ3 194 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 LINC00346Q8IVM7 164 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 SLC37A3Q8NCC5 494 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 TEX47Q8TBZ9 253 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 APOBEC3DQ96AK3 386 aaPredicted RBP11.81□□□□□ -0.52
VARS-225ENST00000482996 HAVCR1Q96D42 359 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 CMBLQ96DG6 245 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 TIMD4Q96H15 378 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 POFUT1Q9H488 388 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 NARFLQ9H6Q4 476 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 MSL2Q9HCI7 577 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 CYB5R1Q9UHQ9 305 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 DNHD1Q96M86 4753 aa11.81□□□□□ -0.52
VARS-225ENST00000482996 COL6A5A8TX70 2615 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 ARRDC5A6NEK1 342 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 RIIAD1A6NNX1 92 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 KIAA1324LA8MWY0 1029 aaPredicted RBP11.8□□□□□ -0.52
VARS-225ENST00000482996 E2F6O75461 281 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 PCMT1P22061 227 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 IGFBP5P24593 272 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 CDH15P55291 814 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 TNFAIP6P98066 277 aaPredicted RBP11.8□□□□□ -0.52
VARS-225ENST00000482996 DBPQ10586 325 aaPredicted RBP11.8□□□□□ -0.52
VARS-225ENST00000482996 CDK5R2Q13319 367 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 CFAP77Q6ZQR2 320 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 C10orf67Q8IYJ2 551 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 CLDND2Q8NHS1 167 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 RAB1CQ92928 201 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 STMN2Q93045 179 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms