RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 FAM78AQ5JUQ0 283 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 FBXW9Q5XUX1 488 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 TTC23LQ6PF05 361 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 PRSS58Q8IYP2 241 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 OFCC1Q8IZS5 231 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 OR52E2Q8NGJ4 325 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 TMEM230Q96A57 120 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 XPO6Q96QU8 1125 aaKnown RBP3.24□□□□□ -1.89
SF3B1-210ENST00000482158 TIMM17AQ99595 171 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 LZTS2Q9BRK4 669 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 C11orf70Q9BRQ4 267 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 BEX1Q9HBH7 125 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 AGPAT4Q9NRZ5 378 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 MTFP1Q9UDX5 166 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 RFNGQ9Y644 331 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 DOCK8Q8NF50 2099 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 TSPOAP1O95153 1857 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 TMEM150BA6NC51 233 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 SLC9A3R1O14745 358 aaPredicted RBP3.23□□□□□ -1.89
SF3B1-210ENST00000482158 RAD51BO15315 384 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 RBFOX2O43251 390 aaKnown RBP eCLIP3.23□□□□□ -1.89
SF3B1-210ENST00000482158 CACNG3O60359 315 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 DNAJB6O75190 326 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 RAB3AP20336 220 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 GALP22466 123 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 U2AF2P26368 475 aaKnown RBP eCLIP3.23□□□□□ -1.892e-11■■■■■ 57.1
SF3B1-210ENST00000482158 VSX2P58304 361 aaPredicted RBP3.23□□□□□ -1.89
SF3B1-210ENST00000482158 PPP1CBP62140 327 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 ITIH4Q14624 930 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 AVPI1Q5T686 147 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 TMEM53Q6P2H8 277 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 OR6N1Q8NGY5 312 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 COQ8AQ8NI60 647 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 SYNPRQ8TBG9 265 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 LRRC29Q8WV35 223 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 NARS2Q96I59 477 aaKnown RBP3.23□□□□□ -1.89
SF3B1-210ENST00000482158 SPIN2AQ99865 258 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 SPIN2BQ9BPZ2 258 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 TMEM38AQ9H6F2 299 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 EXO5Q9H790 373 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 EDA2RQ9HAV5 297 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 ACP6Q9NPH0 428 aa3.23□□□□□ -1.89
SF3B1-210ENST00000482158 PTPRTO14522 1441 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 IGKV1-8A0A0C4DH67 115 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 KBTBD11-OT1A0A1B0GTJ5 212 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 COLCA2A8K830 154 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 BET1O15155 118 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 SOCS1O15524 211 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 RDH16O75452 317 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 OXTP01178 125 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 LINC00869P0C866 280 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 EIF2S2P20042 333 aaKnown RBP3.22□□□□□ -1.89
SF3B1-210ENST00000482158 HCAR3P49019 387 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 P2RX1P51575 399 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 SNRNP35Q16560 246 aaKnown RBP3.22□□□□□ -1.89
SF3B1-210ENST00000482158 SMUG1Q53HV7 270 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 C12orf54Q6X4T0 127 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 MBOAT2Q6ZWT7 520 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 EIF3MQ7L2H7 374 aaKnown RBP3.22□□□□□ -1.89
SF3B1-210ENST00000482158 ZNF709Q8N972 641 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 TTC29Q8NA56 475 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-210ENST00000482158 CHST4Q8NCG5 386 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 OR56A4Q8NGH8 313 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 ZNF317Q96PQ6 595 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-210ENST00000482158 CAMK2N2Q96S95 79 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 UCK2Q9BZX2 261 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 SLC7A5P2Q9GIP4 190 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 C20orf96Q9NUD7 363 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-210ENST00000482158 CLN8Q9UBY8 286 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 ZNF835Q9Y2P0 537 aa3.22□□□□□ -1.89
SF3B1-210ENST00000482158 KCNE1BA0A087WTH5 132 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 H7C1H1 209 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 DNASE2O00115 360 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-210ENST00000482158 FOXH1O75593 365 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 CCNB2O95067 398 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 VAMP5O95183 116 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 APCSP02743 223 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 FGF4P08620 206 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 OR8G3PP0DMU2 310 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 ERGP11308 486 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 CSNK2A2P19784 350 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-210ENST00000482158 DTYMKP23919 212 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 C1orf185Q5T7R7 199 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 SAXO2Q658L1 398 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 SPESP1Q6UW49 350 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 SSX9Q7RTT3 188 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 CDKL3Q8IVW4 592 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-210ENST00000482158 COX18Q8N8Q8 333 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 OR4K5Q8NGD3 323 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 OR52E5Q8NH55 327 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 APH1BQ8WW43 257 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 PTX4Q96A99 478 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 FLYWCH2Q96CP2 140 aaKnown RBP3.21□□□□□ -1.9
SF3B1-210ENST00000482158 RNF145Q96MT1 663 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 ZNF382Q96SR6 550 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 TEKT3Q9BXF9 490 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 ZYG11BQ9C0D3 744 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 OR52D1Q9H346 318 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 AUNIPQ9H7T9 357 aa3.21□□□□□ -1.9
SF3B1-210ENST00000482158 DDX19AQ9NUU7 478 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms