RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 KLHDC3Q9BQ90 382 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 METTL17Q9H7H0 456 aaPredicted RBP2.71□□□□□ -1.98
SMC6-208ENST00000481708 KRCC1Q9NPI7 259 aaPredicted RBP2.71□□□□□ -1.98
SMC6-208ENST00000481708 INTS9Q9NV88 658 aaKnown RBP2.71□□□□□ -1.98
SMC6-208ENST00000481708 PAM16Q9Y3D7 125 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 DNAH17Q9UFH2 4485 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 NAV2Q8IVL1 2488 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 IGHV3-20A0A0C4DH32 117 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 A0A1W2PPI3 338 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 MSGN1A6NI15 193 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 A8MUA0 341 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 FBP2O00757 339 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 ACOT8O14734 319 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 UBE2E1P51965 193 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 MESDQ14696 234 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 KIR2DS3Q14952 304 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 IL17AQ16552 155 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 KLHL38Q2WGJ6 581 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 TMEM249Q2WGJ8 235 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 C10orf25Q5T742 122 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 TMPRSS11AQ6ZMR5 421 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 APTXQ7Z2E3 356 aaKnown RBP2.7□□□□□ -1.98
SMC6-208ENST00000481708 ZFAND4Q86XD8 727 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 ATP6V0D2Q8N8Y2 350 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 OR8K1Q8NGG5 319 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 TMEM239Q8WW34 195 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 DGCR14Q96DF8 476 aaKnown RBP2.7□□□□□ -1.98
SMC6-208ENST00000481708 CENPNQ96H22 339 aaPredicted RBP2.7□□□□□ -1.98
SMC6-208ENST00000481708 MED30Q96HR3 178 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 UBE2E2Q96LR5 201 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 TOLLIPQ9H0E2 274 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 NANSQ9NR45 359 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 TAS2R16Q9NYV7 291 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 SLC17A6Q9P2U8 582 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 MAD1L1Q9Y6D9 718 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 GPR179Q6PRD1 2367 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 MYO10Q9HD67 2058 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 IGHV2-70DA0A0C4DH43 119 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 A0A1B0GTH9 108 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 J3QLI3 93 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 EIF3GO75821 320 aaKnown RBP eCLIP2.7□□□□□ -1.98
SMC6-208ENST00000481708 NSA2O95478 260 aaKnown RBP2.7□□□□□ -1.98
SMC6-208ENST00000481708 TDP2O95551 362 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 TACSTD2P09758 323 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 BGNP21810 368 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 RPL10AP62906 217 aaKnown RBP2.7□□□□□ -1.98
SMC6-208ENST00000481708 SCRN3Q0VDG4 424 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 LAMTOR4Q0VGL1 99 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 DGCR6Q14129 220 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 RTL4Q6ZR62 310 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 PGAP1Q75T13 922 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 DEFB128Q7Z7B8 93 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 SLC34A3Q8N130 599 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 CYP4Z2PQ8N1L4 340 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 OR2T6Q8NHC8 308 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 FNDC8Q8TC99 324 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 SERPINB12Q96P63 405 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 MCHR1Q99705 422 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 SLITRK2Q9H156 845 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 DMAC2Q9NW81 257 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 B3GNT2Q9NY97 397 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 RIMS3Q9UJD0 308 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 PSMD13Q9UNM6 376 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 GCN1Q92616 2671 aaKnown RBP2.7□□□□□ -1.98
SMC6-208ENST00000481708 ARID1BQ8NFD5 2236 aaPredicted RBP2.7□□□□□ -1.98
SMC6-208ENST00000481708 EML6Q6ZMW3 1958 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 KALRNO60229 2985 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 PRRC2BQ5JSZ5 2229 aaKnown RBP2.7□□□□□ -1.98
SMC6-208ENST00000481708 A0A087X1B8 175 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 SMIM28A0A1B0GU29 152 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 PP2D1A8MPX8 630 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 LAD1O00515 517 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 ERI3O43414 337 aaKnown RBP2.7□□□□□ -1.98
SMC6-208ENST00000481708 CLDN11O75508 207 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 MPZL1O95297 269 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 AP2A1O95782 977 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 ATP1A1P05023 1023 aaKnown RBP2.7□□□□□ -1.98
SMC6-208ENST00000481708 C4BPBP20851 252 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 VHLP40337 213 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 CLDN12P56749 244 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 PAFAH1B2P68402 229 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 MYL7Q01449 175 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 ZNF33AQ06730 810 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 RIPPLY1Q0D2K3 151 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 DYNC1I2Q13409 638 aaKnown RBP2.7□□□□□ -1.98
SMC6-208ENST00000481708 ZNF726P1Q15940 193 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 FAHD1Q6P587 224 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 Q6ZSR9 355 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 RIBC1Q8N443 379 aaPredicted RBP2.7□□□□□ -1.98
SMC6-208ENST00000481708 CCDC185Q8N715 623 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 ERMNQ8TAM6 284 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 SSC4DQ8WTU2 575 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 HPSE2Q8WWQ2 592 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 TM2D1Q9BX74 207 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 PAQR5Q9NXK6 330 aaPredicted RBP2.7□□□□□ -1.98
SMC6-208ENST00000481708 IFNKQ9P0W0 207 aa2.7□□□□□ -1.98
SMC6-208ENST00000481708 A0A1B0GVI7 797 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 OR6C70A6NIJ9 312 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 hCG_2039718K7EN88 272 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 SHOX2O60902 331 aaPredicted RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms