RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 SLC25A35Q3KQZ1 300 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 KCTD21Q4G0X4 260 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 CCDC92Q53HC0 331 aaPredicted RBP5.59□□□□□ -1.51
HERC4-210ENST00000480158 XAF1Q6GPH4 301 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 KCTD8Q6ZWB6 473 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 PRSS48Q7RTY5 328 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 KLBQ86Z14 1044 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 SPRYD4Q8WW59 207 aaPredicted RBP5.59□□□□□ -1.51
HERC4-210ENST00000480158 HSD17B8Q92506 261 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 PPP1R14AQ96A00 147 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 MUCL1Q96DR8 90 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 WFIKKN1Q96NZ8 548 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 ATF6BQ99941 703 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 YTHDF1Q9BYJ9 559 aaKnown RBP5.59□□□□□ -1.51
HERC4-210ENST00000480158 SLC17A5Q9NRA2 495 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 ELOVL5Q9NYP7 299 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 MRM2Q9UI43 246 aaKnown RBP5.59□□□□□ -1.51
HERC4-210ENST00000480158 LRP12Q9Y561 859 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 PCDHGB1Q9Y5G3 927 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 TMEM14AQ9Y6G1 99 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 IRGMA1A4Y4 181 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 A1L4Q6 167 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 MAGEA13PA6NCF6 341 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 M0R1B8 84 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 UBL3O95164 117 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 CLDN14O95500 239 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 KRT8P05787 483 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 PLA2G2AP14555 144 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 ANOS1P23352 680 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 HSD11B1P28845 292 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 GABARAPL2P60520 117 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 PLP2Q04941 152 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 SCRN3Q0VDG4 424 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 PPA1Q15181 289 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 PCK2Q16822 640 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 GFOD2Q3B7J2 385 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 TEX30Q5JUR7 227 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 ELFN2Q5R3F8 820 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 LIPNQ5VXI9 398 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 KCTD18Q6PI47 426 aaPredicted RBP5.59□□□□□ -1.51
HERC4-210ENST00000480158 ZNF773Q6PK81 442 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 XKRXQ6PP77 449 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 ZNF627Q7L945 461 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 ZNF584Q8IVC4 421 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 KLHL36Q8N4N3 616 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 STEAP2Q8NFT2 490 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 NANOS1Q8WY41 292 aaKnown RBP5.59□□□□□ -1.51
HERC4-210ENST00000480158 ZNF649Q9BS31 505 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 HDHD5Q9BXW7 423 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 ZNF696Q9H7X3 374 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 PNRC2Q9NPJ4 139 aaKnown RBP5.59□□□□□ -1.51
HERC4-210ENST00000480158 B3GNT2Q9NY97 397 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 EXOSC1Q9Y3B2 195 aaKnown RBP5.59□□□□□ -1.51
HERC4-210ENST00000480158 CACNA1CQ13936 2221 aa5.59□□□□□ -1.52
HERC4-210ENST00000480158 USP9XQ93008 2570 aaPredicted RBP5.58□□□□□ -1.52
HERC4-210ENST00000480158 LOC100509620A0A075B734 347 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 IQCMA0A1B0GVH7 501 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 ZNF878C9JN71 531 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 C19orf84I3L1E1 186 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 INMTO95050 263 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 LALBAP00709 142 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 STOMP27105 288 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 PSMB9P28065 219 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 ARR3P36575 388 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 OPRL1P41146 370 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 SRSF1Q07955 248 aaKnown RBP eCLIP5.58□□□□□ -1.52
HERC4-210ENST00000480158 MFGE8Q08431 387 aaPredicted RBP5.58□□□□□ -1.52
HERC4-210ENST00000480158 NRN1LQ496H8 165 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 TIMM23BQ5SRD1 257 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 TMEM53Q6P2H8 277 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 TMPRSS11AQ6ZMR5 421 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 FAM220AQ7Z4H9 259 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 ZNF679Q8IYX0 411 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 PAQR4Q8N4S7 273 aaPredicted RBP5.58□□□□□ -1.52
HERC4-210ENST00000480158 ZNF808Q8N4W9 903 aaPredicted RBP5.58□□□□□ -1.52
HERC4-210ENST00000480158 ZNF283Q8N7M2 679 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 NANOGP1Q8N7R0 232 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 C1orf162Q8NEQ5 155 aaPredicted RBP5.58□□□□□ -1.52
HERC4-210ENST00000480158 OR1F12Q8NHA8 337 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 RNF133Q8WVZ7 376 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 ASB17Q8WXJ9 295 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 RNASE6Q93091 150 aaKnown RBP5.58□□□□□ -1.52
HERC4-210ENST00000480158 OR8B4Q96RC9 309 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 MND1Q9BWT6 205 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 CDCA4Q9BXL8 241 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 ACOT13Q9NPJ3 140 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 SLC25A15Q9Y619 301 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 A0A087WXM4 84 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 TMEM269A0A1B0GVZ9 245 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 C5orf63A6NC05 138 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 TUBAL3A6NHL2 446 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 METTL15A6NJ78 407 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 J3QKU1 62 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 SYNGR3O43761 229 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 CLPTM1O96005 669 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 PNPP00491 289 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 MT-ND5P03915 603 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 THBDP07204 575 aa5.58□□□□□ -1.52
HERC4-210ENST00000480158 ANXA2P07355 339 aaKnown RBP5.58□□□□□ -1.52
HERC4-210ENST00000480158 FAM157BP0CG42 384 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms