RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 GSG1Q2KHT4 349 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 SLC36A2Q495M3 483 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 LIPNQ5VXI9 398 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 NAA40Q86UY6 237 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 KLBQ86Z14 1044 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 KLHL36Q8N4N3 616 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 STEAP2Q8NFT2 490 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 OR1F12Q8NHA8 337 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 RPS4Y2Q8TD47 263 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 GATAD2BQ8WXI9 593 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 RORBQ92753 470 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 POM121L2Q96KW2 1035 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 COQ7Q99807 217 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 ATF6BQ99941 703 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 C1QTNF6Q9BXI9 259 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 MRPS26Q9BYN8 205 aaKnown RBP11.38□□□□□ -0.59
CHD3-210ENST00000479080 OR10A4Q9H209 315 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 CENPMQ9NSP4 180 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 FAM206AQ9NX38 181 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 PLEK2Q9NYT0 353 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 ZNF319Q9P2F9 582 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 IKZF2Q9UKS7 526 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 AMDHD2Q9Y303 409 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 PCNX1Q96RV3 2341 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 ASH1LQ9NR48 2969 aaKnown RBP11.37□□□□□ -0.59
CHD3-210ENST00000479080 MYL12BO14950 172 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 TMCC2O75069 709 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 SULT1C4O75897 302 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 CCL2P13500 99 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 CBR1P16152 277 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 JUNBP17275 347 aaPredicted RBP11.37□□□□□ -0.59
CHD3-210ENST00000479080 HTR5AP47898 357 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 IDH3GP51553 393 aaPredicted RBP11.37□□□□□ -0.59
CHD3-210ENST00000479080 PRKXP51817 358 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 WNT4P56705 351 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 PCBD1P61457 104 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 NEDD8Q15843 81 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 XKRXQ6PP77 449 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 DEGS2Q6QHC5 323 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 ZNF367Q7RTV3 350 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 KRT77Q7Z794 578 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 PRSS35Q8N3Z0 413 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 ZFP41Q8N8Y5 198 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 IL17RDQ8NFM7 739 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 CA5BP1Q8WTZ4 195 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 TMIGD2Q96BF3 282 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 WFIKKN1Q96NZ8 548 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 MND1Q9BWT6 205 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 HDHD5Q9BXW7 423 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 HDHD2Q9H0R4 259 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 RNF121Q9H920 327 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 OBP2BQ9NPH6 170 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 G6PC2Q9NQR9 355 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 ATPIF1Q9UII2 106 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 GNG8Q9UK08 70 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 SNX5Q9Y5X3 404 aa11.37□□□□□ -0.59
CHD3-210ENST00000479080 ADGRG4Q8IZF6 3080 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 PRR14LQ5THK1 2151 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 SIAH2O43255 324 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 RPP14O95059 124 aaKnown RBP11.36□□□□□ -0.59
CHD3-210ENST00000479080 H2BFMP0C1H6 154 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 ACSM4P0C7M7 580 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 CECR9P0C854 216 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 COX5BP10606 129 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 SLC2A1P11166 492 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 CALCRP30988 508 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 ARR3P36575 388 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 TGFBR2P37173 567 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 WNT5AP41221 380 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 PSMA6P60900 246 aaKnown RBP11.36□□□□□ -0.59
CHD3-210ENST00000479080 UBE2NP61088 152 aaKnown RBP11.36□□□□□ -0.59
CHD3-210ENST00000479080 ACTA2P62736 377 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 ACTG2P63267 376 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 ACSM1Q08AH1 577 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 PPA1Q15181 289 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 SPHARQ15513 63 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 SSX1Q16384 188 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 TMEM53Q6P2H8 277 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 KCTD18Q6PI47 426 aaPredicted RBP11.36□□□□□ -0.59
CHD3-210ENST00000479080 RHOUQ7L0Q8 258 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 DPPA2Q7Z7J5 298 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 CCDC36Q8IYA8 594 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 SVOPQ8N4V2 548 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 YIPF7Q8N8F6 280 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 SNX33Q8WV41 574 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 NANOS1Q8WY41 292 aaKnown RBP11.36□□□□□ -0.59
CHD3-210ENST00000479080 RGP1Q92546 391 aaPredicted RBP11.36□□□□□ -0.59
CHD3-210ENST00000479080 C4orf45Q96LM5 186 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 KCNJ15Q99712 375 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 POFUT1Q9H488 388 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 KCNJ16Q9NPI9 418 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 BABAM2Q9NXR7 383 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 SLC22A13Q9Y226 551 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 ERGIC3Q9Y282 383 aa11.36□□□□□ -0.59
CHD3-210ENST00000479080 OGG1O15527 345 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 ZNF254O75437 659 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 MT-ND5P03915 603 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 SERPINA5P05154 406 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 KRT8P05787 483 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 IGFBP2P18065 325 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms