RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 LRP11Q86VZ4 500 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 ERI1Q8IV48 349 aaKnown RBP17.59■□□□□ 0.41
VARS-224ENST00000479051 PQLC1Q8N2U9 271 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 OR5L1Q8NGL2 311 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 SLC25A40Q8TBP6 338 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 SLC7A6Q92536 515 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 GABARAPL3Q9BY60 117 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 USE1Q9NZ43 259 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 ARFGEF3Q5TH69 2177 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 IGLV3-9A0A075B6K5 115 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 EI24O14681 340 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 F12P00748 615 aaPredicted RBP17.58■□□□□ 0.4
VARS-224ENST00000479051 ADRA2AP08913 450 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 CSF3P09919 207 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 CD99P14209 185 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 RPS27P42677 84 aaKnown RBP17.58■□□□□ 0.4
VARS-224ENST00000479051 ALDH3A2P51648 485 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 DSCR9P59020 149 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 TAF13Q15543 124 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 PCK2Q16822 640 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 SPATA46Q5T0L3 261 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 MBNL2Q5VZF2 373 aaKnown RBP17.58■□□□□ 0.4
VARS-224ENST00000479051 CLEC2AQ6UVW9 174 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 OR6N2Q8NGY6 317 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 NEU4Q8WWR8 484 aaPredicted RBP17.58■□□□□ 0.4
VARS-224ENST00000479051 SPTSSAQ969W0 71 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 ZMYND19Q96E35 227 aaPredicted RBP17.58■□□□□ 0.4
VARS-224ENST00000479051 MARS2Q96GW9 593 aaKnown RBP17.58■□□□□ 0.4
VARS-224ENST00000479051 SORCS2Q96PQ0 1159 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 OR2J1Q9GZK6 312 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 H2AFY2Q9P0M6 372 aaPredicted RBP17.58■□□□□ 0.4
VARS-224ENST00000479051 TAAR3PQ9P1P4 343 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 ITPR3Q14573 2671 aa17.58■□□□□ 0.4
VARS-224ENST00000479051 RTTNQ86VV8 2226 aa17.57■□□□□ 0.4
VARS-224ENST00000479051 F5H5K5 113 aa17.57■□□□□ 0.4
VARS-224ENST00000479051 CLPTM1O96005 669 aa17.57■□□□□ 0.4
VARS-224ENST00000479051 NGFP01138 241 aa17.57■□□□□ 0.4
VARS-224ENST00000479051 ALPLP05186 524 aa17.57■□□□□ 0.4
VARS-224ENST00000479051 DBHP09172 617 aa17.57■□□□□ 0.4
VARS-224ENST00000479051 TPTEP56180 551 aa17.57■□□□□ 0.4
VARS-224ENST00000479051 LCN1P1Q5VSP4 162 aa17.57■□□□□ 0.4
VARS-224ENST00000479051 C12orf73Q69YU5 71 aa17.57■□□□□ 0.4
VARS-224ENST00000479051 KLF14Q8TD94 323 aaPredicted RBP17.57■□□□□ 0.4
VARS-224ENST00000479051 APOBEC3DQ96AK3 386 aaPredicted RBP17.57■□□□□ 0.4
VARS-224ENST00000479051 MAP6Q96JE9 813 aa17.57■□□□□ 0.4
VARS-224ENST00000479051 COPS4Q9BT78 406 aa17.57■□□□□ 0.4
VARS-224ENST00000479051 MARCH7Q9H992 704 aa17.57■□□□□ 0.4
VARS-224ENST00000479051 MYOZ1Q9NP98 299 aaPredicted RBP17.57■□□□□ 0.4
VARS-224ENST00000479051 PNRC2Q9NPJ4 139 aaKnown RBP17.57■□□□□ 0.4
VARS-224ENST00000479051 MYEF2Q9P2K5 600 aaKnown RBP17.57■□□□□ 0.4
VARS-224ENST00000479051 TLX2O43763 284 aaPredicted RBP17.56■□□□□ 0.4
VARS-224ENST00000479051 PRKYO43930 277 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 IGHV3-13P01766 116 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 EPHA2P29317 976 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 ALDH3B1P43353 468 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 SLC15A1P46059 708 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 APOFQ13790 326 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 EIF2B1Q14232 305 aaKnown RBP17.56■□□□□ 0.4
VARS-224ENST00000479051 CBR4Q8N4T8 237 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 TCEANCQ8N8B7 351 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 TMEM163Q8TC26 289 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 EME1Q96AY2 570 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 SLAMF6Q96DU3 332 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 RHNO1Q9BSD3 238 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 TMUB1Q9BVT8 246 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 CENPMQ9NSP4 180 aa17.56■□□□□ 0.4
VARS-224ENST00000479051 DDX28Q9NUL7 540 aaKnown RBP17.56■□□□□ 0.4
VARS-224ENST00000479051 CGGBP1Q9UFW8 167 aaPredicted RBP17.56■□□□□ 0.4
VARS-224ENST00000479051 MAP1AP78559 2803 aaPredicted RBP17.56■□□□□ 0.4
VARS-224ENST00000479051 PLSCR5A0PG75 271 aa17.55■□□□□ 0.4
VARS-224ENST00000479051 ZNF878C9JN71 531 aa17.55■□□□□ 0.4
VARS-224ENST00000479051 LIPAP38571 399 aa17.55■□□□□ 0.4
VARS-224ENST00000479051 CDC42P60953 191 aa17.55■□□□□ 0.4
VARS-224ENST00000479051 MAD2L1BPQ15013 274 aaPredicted RBP17.55■□□□□ 0.4
VARS-224ENST00000479051 ZBTB49Q6ZSB9 765 aa17.55■□□□□ 0.4
VARS-224ENST00000479051 DPY19L4Q7Z388 723 aa17.55■□□□□ 0.4
VARS-224ENST00000479051 TIGD4Q8IY51 512 aa17.55■□□□□ 0.4
VARS-224ENST00000479051 ZNF454Q8N9F8 522 aa17.55■□□□□ 0.4
VARS-224ENST00000479051 BBS1Q8NFJ9 593 aa17.55■□□□□ 0.4
VARS-224ENST00000479051 TPK1Q9H3S4 243 aa17.55■□□□□ 0.4
VARS-224ENST00000479051 CYSLTR2Q9NS75 346 aa17.55■□□□□ 0.4
VARS-224ENST00000479051 STARD10Q9Y365 291 aa17.55■□□□□ 0.4
VARS-224ENST00000479051 M0R135 149 aa17.54■□□□□ 0.4
VARS-224ENST00000479051 ACSM4P0C7M7 580 aa17.54■□□□□ 0.4
VARS-224ENST00000479051 FOSL1P15407 271 aa17.54■□□□□ 0.4
VARS-224ENST00000479051 SLC2A5P22732 501 aa17.54■□□□□ 0.4
VARS-224ENST00000479051 MPV17P39210 176 aa17.54■□□□□ 0.4
VARS-224ENST00000479051 PDLIM4P50479 330 aa17.54■□□□□ 0.4
VARS-224ENST00000479051 GRB2P62993 217 aaKnown RBP17.54■□□□□ 0.4
VARS-224ENST00000479051 ALKBH6Q3KRA9 238 aa17.54■□□□□ 0.4
VARS-224ENST00000479051 KRTAP27-1Q3LI81 207 aa17.54■□□□□ 0.4
VARS-224ENST00000479051 ZMAT1Q5H9K5 638 aa17.54■□□□□ 0.4
VARS-224ENST00000479051 NXNL2Q5VZ03 156 aa17.54■□□□□ 0.4
VARS-224ENST00000479051 GID4Q8IVV7 300 aa17.54■□□□□ 0.4
VARS-224ENST00000479051 ZCCHC24Q8N2G6 241 aaKnown RBP17.54■□□□□ 0.4
VARS-224ENST00000479051 ZNF799Q96GE5 643 aa17.54■□□□□ 0.4
VARS-224ENST00000479051 TOR3AQ9H497 397 aa17.54■□□□□ 0.4
VARS-224ENST00000479051 TRIM64A6NGJ6 449 aa17.53■□□□□ 0.4
VARS-224ENST00000479051 TRIM64BA6NI03 449 aa17.53■□□□□ 0.4
VARS-224ENST00000479051 SLC22A31A6NKX4 558 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms