RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 NT5EP21589 574 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 DRD5P21918 477 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 TIA1P31483 386 aaKnown RBP eCLIP3.55□□□□□ -1.84
VPS50-214ENST00000477935 KCNJ1P48048 391 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 RGS4P49798 205 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 ATP4BP51164 291 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 ZNF83P51522 516 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 CARD18P57730 90 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 MRPS11P82912 194 aaKnown RBP3.55□□□□□ -1.84
VPS50-214ENST00000477935 PLCXD2Q0VAA5 305 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 DEFB121Q5J5C9 76 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 ZNF311Q5JNZ3 666 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 SPANXN4Q5MJ08 99 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 SLC25A30Q5SVS4 291 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 OR5M10Q6IEU7 315 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 DGAT2L6Q6ZPD8 337 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 NUFIP2Q7Z417 695 aaKnown RBP3.55□□□□□ -1.84
VPS50-214ENST00000477935 GPR141Q7Z602 305 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 GALNT10Q86SR1 603 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 CCDC50Q8IVM0 306 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 TUSC5Q8IXB3 177 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 PRR22Q8IZ63 422 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 OTUD6BQ8N6M0 293 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 FADS6Q8N9I5 356 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 ACOT4Q8N9L9 421 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 OR52K1Q8NGK4 314 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 OR2V1Q8NHB1 315 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 GRK7Q8WTQ7 553 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 RAB39BQ96DA2 213 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 COL21A1Q96P44 957 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 OR4K3Q96R72 315 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 B9D2Q9BPU9 175 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 MAPKAP1Q9BPZ7 522 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 CAPS2Q9BXY5 557 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 NXF5Q9H1B4 397 aaKnown RBP3.55□□□□□ -1.84
VPS50-214ENST00000477935 SPNS1Q9H2V7 528 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 DSN1Q9H410 356 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 CXorf21Q9HAI6 301 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 CA10Q9NS85 328 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 TREM2Q9NZC2 230 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 GALPQ9UBC7 116 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 DNAJB9Q9UBS3 223 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 KLK11Q9UBX7 282 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 PHF11Q9UIL8 331 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 SLC25A15Q9Y619 301 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 POMT1Q9Y6A1 747 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 WNK2Q9Y3S1 2297 aa3.55□□□□□ -1.84
VPS50-214ENST00000477935 hCG_1818297A0A087WSY0 165 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 A0A087WZY1 265 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 CIB4A0PJX0 185 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 CTAGE15A4D2H0 777 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 HTR3EA5X5Y0 456 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 RBMY1BA6NDE4 496 aaKnown RBP3.54□□□□□ -1.84
VPS50-214ENST00000477935 RBMY1EA6NEQ0 496 aaKnown RBP3.54□□□□□ -1.84
VPS50-214ENST00000477935 E5RGE8 158 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 GOLGA8TH3BQL2 631 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 FOXE1O00358 373 aaPredicted RBP3.54□□□□□ -1.84
VPS50-214ENST00000477935 BCL2L11O43521 198 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 PSTPIP1O43586 416 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 CXCL13O43927 109 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 MTRF1O75570 445 aaKnown RBP3.54□□□□□ -1.84
VPS50-214ENST00000477935 REM1O75628 298 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 SLU7O95391 586 aaKnown RBP3.54□□□□□ -1.84
VPS50-214ENST00000477935 GUCA1CO95843 209 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 OR4A8P0C604 315 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 RBMY1DP0C7P1 496 aaKnown RBP3.54□□□□□ -1.84
VPS50-214ENST00000477935 C1GALT1C1LP0DN25 315 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 SKILP12757 684 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 OGNP20774 298 aaKnown RBP3.54□□□□□ -1.84
VPS50-214ENST00000477935 GPX3P22352 226 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 IGHV1-2P23083 117 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 ME2P23368 584 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 ATP5A1P25705 553 aaKnown RBP3.54□□□□□ -1.84
VPS50-214ENST00000477935 PIK3R1P27986 724 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 SSTR1P30872 391 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 MAGEA1P43355 309 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 PPICP45877 212 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 ARFIP1P53367 373 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 EIF3EP60228 445 aaKnown RBP3.54□□□□□ -1.84
VPS50-214ENST00000477935 RAB10P61026 200 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 BTG1P62324 171 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 IL1RL1Q01638 556 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 TMEM44Q2T9K0 475 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 HIGD2BQ4VC39 106 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 ARMCX4Q5H9R4 360 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 HBMQ6B0K9 141 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 SH2D6Q7Z4S9 175 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 CTAGE6Q86UF2 777 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 SLC25A42Q86VD7 318 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 THOC6Q86W42 341 aaKnown RBP3.54□□□□□ -1.84
VPS50-214ENST00000477935 CROCCP3Q8IVE0 287 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 HSCBQ8IWL3 235 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 RIBC1Q8N443 379 aaPredicted RBP3.54□□□□□ -1.84
VPS50-214ENST00000477935 C17orf78Q8N4C9 275 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 TMEM86BQ8N661 226 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 ZNF433Q8N7K0 673 aaPredicted RBP3.54□□□□□ -1.84
VPS50-214ENST00000477935 OR2M3Q8NG83 312 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 OR4F15Q8NGB8 312 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 OR9Q2Q8NGE9 314 aa3.54□□□□□ -1.84
VPS50-214ENST00000477935 OR8K1Q8NGG5 319 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms