RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 PSG4Q00888 419 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 KRR1Q13601 381 aaKnown RBP7.11□□□□□ -1.27
HDAC6-221ENST00000477561 GGTLC2Q14390 218 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 OCLNQ16625 522 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 SLC25A30Q5SVS4 291 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 FAM27BQ5VT28 67 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 FAM205BPQ63HN1 556 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 ACSM5Q6NUN0 579 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 ZNF774Q6NX45 483 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 DPY19L2P2Q6ZN68 376 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 FAM122BQ7Z309 247 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 DPPA2Q7Z7J5 298 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-221ENST00000477561 LNX2Q8N448 690 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 IQCF1Q8N6M8 205 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 BPIFB6Q8NFQ5 453 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 OR8D4Q8NGM9 314 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 OR1J2Q8NGS2 313 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 TMEM163Q8TC26 289 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 FNDC8Q8TC99 324 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 APH1BQ8WW43 257 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 MYDGFQ969H8 173 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 ERMAPQ96PL5 475 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-221ENST00000477561 IFT27Q9BW83 186 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 OR2H1Q9GZK4 316 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 NRIP3Q9NQ35 241 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 YAE1D1Q9NRH1 226 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 PLCXD1Q9NUJ7 323 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 COA3Q9Y2R0 106 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-221ENST00000477561 SNX5Q9Y5X3 404 aa7.11□□□□□ -1.27
HDAC6-221ENST00000477561 LOC100509620A0A075B734 347 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 A0A1W2PPW3 197 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 IRGMA1A4Y4 181 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 C5orf49A4QMS7 147 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 EFCAB10A6NFE3 127 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 RIIAD1A6NNX1 92 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 M0R233 179 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 BHLHE40O14503 412 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 SURF4O15260 269 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 SYNGR3O43761 229 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 TLX2O43763 284 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 IDH3BO43837 385 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 SLC16A7O60669 478 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 WBP4O75554 376 aaKnown RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 MPZL1O95297 269 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 GPANK1O95872 356 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 CST2P09228 141 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 SMIM18P0DKX4 95 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 APEHP13798 732 aaKnown RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 DAOP14920 347 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 ATP6V1B1P15313 513 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 ZNF3P17036 446 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 MSR1P21757 451 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 NOS3P29474 1203 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 SDHAP31040 664 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 WNT5AP41221 380 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 CDKN2AP42771 156 aaKnown RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 RAD52P43351 418 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 RPL5P46777 297 aaKnown RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 CENPAP49450 140 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 GDI2P50395 445 aaKnown RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 UCP2P55851 309 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 RPS23P62266 143 aaKnown RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 GLO1Q04760 184 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 LOXL1Q08397 574 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 APOFQ13790 326 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 ENDOGQ14249 297 aaKnown RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 TMEM249Q2WGJ8 235 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 SPATA46Q5T0L3 261 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 RGS7BPQ6MZT1 257 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 ZNF773Q6PK81 442 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 FOXL2NBQ6ZUU3 175 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 TCEANCQ8N8B7 351 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 ZNF540Q8NDQ6 660 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 OR1J1Q8NGS3 322 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 OR4Q3Q8NH05 313 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 NEU4Q8WWR8 484 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 RFKQ969G6 155 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 UBE2FQ969M7 185 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 POM121L2Q96KW2 1035 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 TSSK2Q96PF2 358 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 IL4I1Q96RQ9 567 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 GPX7Q96SL4 187 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 PIMREGQ9BSJ6 248 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 ZNF416Q9BWM5 594 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 NUAK2Q9H093 628 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 WNT5BQ9H1J7 359 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 SYT4Q9H2B2 425 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 C1orf198Q9H425 327 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 FN3KQ9H479 309 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 POLE4Q9NR33 117 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 CNOT2Q9NZN8 540 aaKnown RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 H2AFY2Q9P0M6 372 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 TAAR3PQ9P1P4 343 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 KLHL21Q9UJP4 597 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 RPL36Q9Y3U8 105 aaKnown RBP7.1□□□□□ -1.27
HDAC6-221ENST00000477561 TIMM10BQ9Y5J6 103 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 ARFGEF3Q5TH69 2177 aa7.1□□□□□ -1.27
HDAC6-221ENST00000477561 CSPG4Q6UVK1 2322 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 IGHV4-61A0A0C4DH41 118 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms