RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 GLTPQ9NZD2 209 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 MRM2Q9UI43 246 aaKnown RBP13.18□□□□□ -0.3
HDAC6-220ENST00000477528 EPOPA6NHQ4 379 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 PLA2G10O15496 165 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 IGKV1D-16P01601 117 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 DBHP09172 617 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 MAMSTRQ6ZN01 415 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 ANKRD37Q7Z713 158 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 MKXQ8IYA7 352 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 CMTM1Q8IZ96 169 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 CPT1CQ8TCG5 803 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 PIGTQ969N2 578 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 QPCTLQ9NXS2 382 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 GDF2Q9UK05 429 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-220ENST00000477528 SLC5A6Q9Y289 635 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 WNT1P04628 370 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 ECH1Q13011 328 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 C11orf40Q8WZ69 217 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 MENTQ9BUN1 341 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 TBX6O95947 436 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-220ENST00000477528 HLA-BQ31612 363 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 TMUB2Q71RG4 321 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 NAXDQ8IW45 347 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 D2HGDHQ8N465 521 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 BANF2Q9H503 90 aa13.18□□□□□ -0.3
HDAC6-220ENST00000477528 A6NLC8 198 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 SGCEO43556 437 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 HRGP04196 525 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 ARG2P78540 354 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 ZNF616Q08AN1 781 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 RHBDD2Q6NTF9 364 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 GUSBP11Q6P575 273 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 TRIM64BA6NI03 449 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 TOX3O15405 576 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-220ENST00000477528 GPANK1O95872 356 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 ZMYND11Q15326 602 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 MESTQ5EB52 335 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 OR10K2Q6IF99 312 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 DEGS2Q6QHC5 323 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 ZNF813Q6ZN06 617 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 ZNF695Q8IW36 515 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 NOXO1Q8NFA2 376 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 YIPF5Q969M3 257 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 PAPOLGQ9BWT3 736 aaKnown RBP13.17□□□□□ -0.3
HDAC6-220ENST00000477528 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-220ENST00000477528 PLPP3O14495 311 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 TGM6O95932 706 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 RPS4Y1P22090 263 aaKnown RBP13.17□□□□□ -0.3
HDAC6-220ENST00000477528 MAGEB1P43366 347 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 ZNF133P52736 654 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-220ENST00000477528 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-220ENST00000477528 LCN10Q6JVE6 187 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 COMTD1Q86VU5 262 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 MTCH2Q9Y6C9 303 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 CEP290O15078 2479 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 PTPRDP23468 1912 aa13.17□□□□□ -0.3
HDAC6-220ENST00000477528 A0A1B0GTH9 108 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 IL5P05113 134 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 MYBPHQ13203 477 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 ZNF658BQ4V348 819 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-220ENST00000477528 FHL5Q5TD97 284 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 ZNF321PQ8N8H1 164 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 APOBEC4Q8WW27 367 aaKnown RBP13.16□□□□□ -0.3
HDAC6-220ENST00000477528 OR7C1O76099 320 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-220ENST00000477528 ELFN2Q5R3F8 820 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 C9orf135Q5VTT2 229 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 CD200R1LQ6Q8B3 271 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 NLRC5Q86WI3 1866 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 CDC20BQ86Y33 519 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 PLPP5Q8NEB5 264 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 FAM71CQ8NEG0 241 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 SEMA6DQ8NFY4 1073 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 OR5L1Q8NGL2 311 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 C1orf123Q9NWV4 160 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 COQ3Q9NZJ6 369 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 HRH3Q9Y5N1 445 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 STMND1H3BQB6 276 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 CTDSPLO15194 276 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 IFNA5P01569 189 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 PDGFAP04085 211 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 CAMLGP49069 296 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 TGFBR3Q03167 851 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 C6orf15Q6UXA7 325 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-220ENST00000477528 GLDNQ6ZMI3 551 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-220ENST00000477528 TRILQ7L0X0 811 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 MDGA2Q7Z553 956 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 OR2AK2Q8NG84 335 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 SCGB1C1Q8TD33 95 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 SCARB1Q8WTV0 552 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 KCNIP1Q9NZI2 227 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 SIRT4Q9Y6E7 314 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-220ENST00000477528 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 TCRBV16S1A1N1A0A5B0 115 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 TRAPPC2LH3BP13 241 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 CD46P15529 392 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 CTLA4P16410 223 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 FMODQ06828 376 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 ARSKQ6UWY0 536 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 MRGPREQ86SM8 312 aa13.16□□□□□ -0.3
HDAC6-220ENST00000477528 YRDCQ86U90 279 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms