RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 GPR160Q9UJ42 338 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 GMPPBQ9Y5P6 360 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 PMF1-BGLAPU3KQ54 211 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 CREBBPQ92793 2442 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 CSMD2Q7Z408 3487 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 LOC100130705A0A1B0GUX0 176 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 SNTNA6NMZ2 147 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 OVOL3O00110 214 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 SLC16A6O15403 523 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 ABHD16AO95870 558 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 CD8AP01732 235 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 APOC1P02654 83 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 LCKP06239 509 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 FAM157BP0CG42 384 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 TPTEP56180 551 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 SNRPGP62308 76 aaKnown RBP11.31□□□□□ -0.6
TOP3A-205ENST00000477508 DBPQ10586 325 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-205ENST00000477508 POU4F2Q12837 409 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 GGTLC2Q14390 218 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 MOGQ16653 247 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 LRRC36Q1X8D7 754 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 ZNF718Q3SXZ3 478 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 SLC25A30Q5SVS4 291 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 OGFRL1Q5TC84 451 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-205ENST00000477508 MEDAGQ5VYS4 303 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 TMEM154Q6P9G4 183 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 LYPD4Q6UWN0 246 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 SLC16A9Q7RTY1 509 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 DPY19L4Q7Z388 723 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 DCXRQ7Z4W1 244 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 GALNT4Q8N4A0 578 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 BBS1Q8NFJ9 593 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 OR5L1Q8NGL2 311 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 OR1J1Q8NGS3 322 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 MRPL24Q96A35 216 aaKnown RBP11.31□□□□□ -0.6
TOP3A-205ENST00000477508 MAP6Q96JE9 813 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 MBOAT4Q96T53 435 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 MNTQ99583 582 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 GSX2Q9BZM3 304 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 YIPF3Q9GZM5 350 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 PLK3Q9H4B4 646 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 RNPEPL1Q9HAU8 725 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 FAM118AQ9NWS6 357 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 WARS2Q9UGM6 360 aaKnown RBP11.31□□□□□ -0.6
TOP3A-205ENST00000477508 TMEM14AQ9Y6G1 99 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 ARID1AO14497 2285 aa11.31□□□□□ -0.6
TOP3A-205ENST00000477508 ZNF878C9JN71 531 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 GPRIN2O60269 458 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 ZNF250P15622 560 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 PEX2P28328 305 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 HTR1FP30939 366 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 WNT5AP41221 380 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 PPP1CBP62140 327 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 GRB2P62993 217 aaKnown RBP11.3□□□□□ -0.6
TOP3A-205ENST00000477508 EIF2B1Q14232 305 aaKnown RBP11.3□□□□□ -0.6
TOP3A-205ENST00000477508 TAF13Q15543 124 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 SWI5Q1ZZU3 235 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 KRTAP27-1Q3LI81 207 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 TTC23Q5W5X9 447 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 LPCAT4Q643R3 524 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 C11orf71Q6IPW1 123 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 OTOSQ8NHW6 89 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 SYNPRQ8TBG9 265 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 ST7LQ8TDW4 575 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 APOBEC3DQ96AK3 386 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-205ENST00000477508 SLAMF6Q96DU3 332 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 Q96MT0 163 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 CNN2Q99439 309 aaKnown RBP11.3□□□□□ -0.6
TOP3A-205ENST00000477508 APOL4Q9BPW4 351 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 ABHD6Q9BV23 337 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 PNRC2Q9NPJ4 139 aaKnown RBP11.3□□□□□ -0.6
TOP3A-205ENST00000477508 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.3□□□□□ -0.6
TOP3A-205ENST00000477508 GRIP1Q9Y3R0 1128 aa11.3□□□□□ -0.6
TOP3A-205ENST00000477508 CCDC182A6NF36 153 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 F5H5K5 113 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 H7C417 338 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 M0R129 80 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 LYNP07948 512 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 ERCC1P07992 297 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-205ENST00000477508 GCH1P30793 250 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 RPS27P42677 84 aaKnown RBP11.29□□□□□ -0.6
TOP3A-205ENST00000477508 KLF3P57682 345 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-205ENST00000477508 RIPK1Q13546 671 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 OCLNQ16625 522 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 MST1LQ2TV78 715 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 KCTD18Q6PI47 426 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-205ENST00000477508 DRAM2Q6UX65 266 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 ZNF101Q8IZC7 436 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 ABHD4Q8TB40 342 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 RNF133Q8WVZ7 376 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 ASB17Q8WXJ9 295 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 ZNF582Q96NG8 517 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-205ENST00000477508 DOK1Q99704 481 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 KCNJ15Q99712 375 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 COPS4Q9BT78 406 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 CACNG6Q9BXT2 260 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 CXXC4Q9H2H0 198 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 VCX3BQ9H321 246 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 SP140LQ9H930 580 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 BARX1Q9HBU1 254 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms