RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 RIMS3Q9UJD0 308 aa5.57□□□□□ -1.52
RTFDC1-206ENST00000477485 PLXNB1O43157 2135 aa5.57□□□□□ -1.52
RTFDC1-206ENST00000477485 BTBD17A6NE02 478 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 A6NIZ1 184 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 ZNF879B4DU55 563 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 P2RY10O00398 339 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 FBP2O00757 339 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 XKRYO14609 159 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 PHYHO14832 338 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 PIN1P1O15428 100 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 ICMTO60725 284 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 OR5F1O95221 314 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 IGHV4-59P01825 116 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 HLA-DPB1P04440 258 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 SCG5P05408 212 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 TUBG1P23258 451 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 FPR3P25089 353 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 IFNA8P32881 189 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 CFHR2P36980 270 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 SLC9A3P48764 834 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 RAP1BP61224 184 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 RAP1AP62834 184 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 PAX2Q02962 417 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 OR8B8Q15620 311 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 FAM189A2Q15884 450 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 LRRC23Q53EV4 343 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 PRAMEF6Q5VXH4 476 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 WDR25Q64LD2 544 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 SFRP4Q6FHJ7 346 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 DHRS7BQ6IAN0 325 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 DLEU7Q6UYE1 221 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 DCDC5Q6ZRR9 648 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 SYT9Q86SS6 491 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 OR8G5Q8NG78 346 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 OR5L1Q8NGL2 311 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 LINC01006Q8NI28 216 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 LRRC8CQ8TDW0 803 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 LZICQ8WZA0 190 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 DYRK2Q92630 601 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 KCTD12Q96CX2 325 aaKnown RBP5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 HAVCR1Q96D42 359 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 NMD3Q96D46 503 aaKnown RBP5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 BPIFA2Q96DR5 249 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 TPD52L3Q96J77 140 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 CGREF1Q99674 301 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 TRIM15Q9C019 465 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 TUBG2Q9NRH3 451 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 UFSP2Q9NUQ7 469 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 ACOXLQ9NUZ1 547 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 ERVK-18Q9QC07 812 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 GRHPRQ9UBQ7 328 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 BAG5Q9UL15 447 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 TMCC3Q9ULS5 477 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 HIF3AQ9Y2N7 669 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 NDUFAF1Q9Y375 327 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 FAM96BQ9Y3D0 163 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 POMT1Q9Y6A1 747 aa5.56□□□□□ -1.52
RTFDC1-206ENST00000477485 A0A0U1RQK1 487 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 CENPVL3A0A0U1RRI6 287 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 ANKRD61A6NGH8 418 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 NPIPB13A6NJU9 1138 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 EFCAB9A8MZ26 197 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 C22orf46C9J442 243 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 NPIPB4C9JG80 1138 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 G3V4G9 280 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 MLNRO43193 412 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 ADAM20O43506 726 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 DBHP09172 617 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 COX5BP10606 129 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 RAC2P15153 192 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 YAP1P46937 504 aaKnown RBP5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 SLC18A1P54219 525 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 RAD23AP54725 363 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 BPIFB3P59826 476 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 HOXA4Q00056 320 aaPredicted RBP5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 AQP6Q13520 282 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 VMACQ2NL98 169 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 CD276Q5ZPR3 534 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 OAFQ86UD1 273 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 NRMQ8IXM6 262 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 TMEM86BQ8N661 226 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 PNLDC1Q8NA58 520 aaKnown RBP5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 OR13C2Q8NGS9 318 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 OR1F12Q8NHA8 337 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 DYDC1Q8WWB3 177 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 ST8SIA4Q92187 359 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 RASD2Q96D21 266 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 ZNF570Q96NI8 536 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 WDFY2Q96P53 400 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 CCDC28BQ9BUN5 200 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 HCAR1Q9BXC0 346 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 PARD6BQ9BYG5 372 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 NDEL1Q9GZM8 345 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 PCDHAC1Q9H158 963 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 RASSF4Q9H2L5 321 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 RABEP2Q9H5N1 569 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 KAT8Q9H7Z6 458 aaKnown RBP5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 TMEM100Q9NV29 134 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 ONECUT1Q9UBC0 465 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 RHCGQ9UBD6 479 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms