RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 BCL7BQ9BQE9 202 aa3.67□□□□□ -1.82
VPS50-212ENST00000476413 LZTS2Q9BRK4 669 aa3.67□□□□□ -1.82
VPS50-212ENST00000476413 SPNS1Q9H2V7 528 aa3.67□□□□□ -1.82
VPS50-212ENST00000476413 MTFP1Q9UDX5 166 aa3.67□□□□□ -1.82
VPS50-212ENST00000476413 RAB26Q9ULW5 256 aa3.67□□□□□ -1.82
VPS50-212ENST00000476413 GPATCH8Q9UKJ3 1502 aaKnown RBP3.66□□□□□ -1.82
VPS50-212ENST00000476413 IGHV5-10-1A0A0J9YXX1 117 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 TSPAN11A1L157 253 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 H7C0C1 242 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 ENTPD5O75356 428 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 SCELO95171 688 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 IGHV1-8P0DP01 117 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 WARSP23381 471 aaKnown RBP3.66□□□□□ -1.82
VPS50-212ENST00000476413 RFC3P40938 356 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 RPS9P46781 194 aaKnown RBP3.66□□□□□ -1.82
VPS50-212ENST00000476413 DAOAP59103 153 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 PPP1CBP62140 327 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 CDH17Q12864 832 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 NTM-AS1Q6ZSK4 140 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 OR10G2Q8NGC3 310 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 LRRC29Q8WV35 223 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 NRBF2Q96F24 287 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 RNF145Q96MT1 663 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 PIGUQ9H490 435 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 CYP3A43Q9HB55 503 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 PRSS16Q9NQE7 514 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 OR12D3Q9UGF7 316 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 KLK12Q9UKR0 248 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 YARS2Q9Y2Z4 477 aaKnown RBP3.66□□□□□ -1.82
VPS50-212ENST00000476413 SAR1BQ9Y6B6 198 aa3.66□□□□□ -1.82
VPS50-212ENST00000476413 IGLV3-16A0A075B6K0 115 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 NME4O00746 187 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 ERI3O43414 337 aaKnown RBP3.65□□□□□ -1.83
VPS50-212ENST00000476413 POLR2MP0CAP2 368 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 USF1P22415 310 aaPredicted RBP3.65□□□□□ -1.83
VPS50-212ENST00000476413 CD82P27701 267 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 ZNF121P58317 390 aaPredicted RBP3.65□□□□□ -1.83
VPS50-212ENST00000476413 GABRA6Q16445 453 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 FAM83EQ2M2I3 478 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 CHRFAM7AQ494W8 412 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 GCSAMLQ5JQS6 135 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 TTC19Q6DKK2 380 aaPredicted RBP3.65□□□□□ -1.83
VPS50-212ENST00000476413 ABHD12BQ7Z5M8 362 aaPredicted RBP3.65□□□□□ -1.83
VPS50-212ENST00000476413 FAM71AQ8IYT1 594 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 CYB561D1Q8N8Q1 229 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 OR5AR1Q8NGP9 310 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 OR51F2Q8NH61 342 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 OR5W2Q8NH69 310 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 OR51E1Q8TCB6 317 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 NTAN1Q96AB6 310 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 RPEQ96AT9 228 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 TM4SF18Q96CE8 201 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 OR2AG1Q9H205 316 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 SYNDIG1Q9H7V2 258 aa3.65□□□□□ -1.83
VPS50-212ENST00000476413 ADAMTS13Q76LX8 1427 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 IGKV1-8A0A0C4DH67 115 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 A0A1W2PRD5 423 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 GABRPO00591 440 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 RDH16O75452 317 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 CTSLP07711 333 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 TACSTD2P09758 323 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 ERGP11308 486 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 PGAM1P18669 254 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 SRMP19623 302 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 TCN2P20062 427 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 RAB3AP20336 220 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 SERPINB8P50452 374 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 MNAT1P51948 309 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 ESRRGP62508 458 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 RAP1AP62834 184 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 ARG2P78540 354 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 IFT88Q13099 833 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 TIFABQ6ZNK6 161 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 MRPL55Q7Z7F7 128 aaKnown RBP3.64□□□□□ -1.83
VPS50-212ENST00000476413 SAXO1Q8IYX7 474 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 CMTM8Q8IZV2 173 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 PGAM4Q8N0Y7 254 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 METTL13Q8N6R0 699 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 PIFOQ8TCI5 191 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 C9orf72Q96LT7 481 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 BLZF1Q9H2G9 400 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 MRM3Q9HC36 420 aaKnown RBP3.64□□□□□ -1.83
VPS50-212ENST00000476413 ZDHHC4Q9NPG8 344 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 ZNF222Q9UK12 451 aa3.64□□□□□ -1.83
VPS50-212ENST00000476413 TSSC4Q9Y5U2 329 aaPredicted RBP3.64□□□□□ -1.83
VPS50-212ENST00000476413 IGLV1-50A0A075B6I6 118 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 TMEM120BA0PK00 339 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 GCM2O75603 506 aaPredicted RBP3.63□□□□□ -1.83
VPS50-212ENST00000476413 HPRT1P00492 218 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 PGA5P0DJD9 388 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 GABRG2P18507 467 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 HCAR3P49019 387 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 FABP6P51161 128 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 P2RX1P51575 399 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 VSX2P58304 361 aaPredicted RBP3.63□□□□□ -1.83
VPS50-212ENST00000476413 UBE2NP61088 152 aaKnown RBP3.63□□□□□ -1.83
VPS50-212ENST00000476413 SYCNQ0VAF6 134 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 HADHQ16836 314 aaKnown RBP3.63□□□□□ -1.83
VPS50-212ENST00000476413 HORMAD1Q86X24 394 aa3.63□□□□□ -1.83
VPS50-212ENST00000476413 ZNF321PQ8N8H1 164 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms