RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ZNF391Q9UJN7 358 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 STUB1Q9UNE7 303 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 POLR1DQ9Y2S0 133 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 LSM2Q9Y333 95 aaKnown RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 INTS1Q8N201 2190 aaKnown RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 A0A1W2PPL8 197 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 TMEM212A6NML5 194 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 E9PLN8 166 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 H0YC42 278 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 DCTN6O00399 190 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 SELENOFO60613 162 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 RAMP1O60894 148 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 LILRA1O75019 489 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ARL6IP5O75915 188 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 GABARAPO95166 117 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 TFP02787 698 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 LCKP06239 509 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 SPARCP09486 303 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 H2BFMP0C1H6 154 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 CD8BP10966 210 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 CELP19835 753 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 SOX6P35712 828 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 SELENOPP49908 381 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ART1P52961 327 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 GP2P55259 537 aaKnown RBP6.17□□□□□ -1.42
SHQ1-207ENST00000475558 OR12D2P58182 307 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 HIST1H3AP68431 136 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ROR2Q01974 943 aaKnown RBP6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF85Q03923 595 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 PLP2Q04941 152 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 EIF2B1Q14232 305 aaKnown RBP6.17□□□□□ -1.42
SHQ1-207ENST00000475558 CDSNQ15517 529 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 MEP1BQ16820 701 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 DGUOKQ16854 277 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF829Q3KNS6 432 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF684Q5T5D7 378 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 C1orf185Q5T7R7 199 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 HIST2H3PS2Q5TEC6 136 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 LIPNQ5VXI9 398 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 CARD17Q5XLA6 110 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 TMEM53Q6P2H8 277 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF585AQ6P3V2 769 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ANKRD16Q6P6B7 361 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ARL9Q6T311 187 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 Q6ZT83 130 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 HIST2H3AQ71DI3 136 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 TPRA1Q86W33 373 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 UBE2J2Q8N2K1 259 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 SLC22A24Q8N4F4 322 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 C1orf162Q8NEQ5 155 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-207ENST00000475558 IL17RDQ8NFM7 739 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 KBTBD8Q8NFY9 601 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 OR52N5Q8NH56 324 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 CA5BP1Q8WTZ4 195 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ABHD3Q8WU67 409 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 RNF133Q8WVZ7 376 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 DNAJA3Q96EY1 480 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 LRRC46Q96FV0 321 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 C4orf36Q96KX1 117 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 DCLRE1CQ96SD1 692 aaKnown RBP6.17□□□□□ -1.42
SHQ1-207ENST00000475558 FOXB1Q99853 325 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 VKORC1Q9BQB6 163 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ABHD6Q9BV23 337 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 SFXN3Q9BWM7 321 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ELOVL3Q9HB03 270 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 CRLF2Q9HC73 371 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 NEK6Q9HC98 313 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 TMEM38BQ9NVV0 291 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 MRPL22Q9NWU5 206 aaKnown RBP6.17□□□□□ -1.42
SHQ1-207ENST00000475558 NDUFB11Q9NX14 153 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 GALNT8Q9NY28 637 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 COQ3Q9NZJ6 369 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ENPP5Q9UJA9 477 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 GNG8Q9UK08 70 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ING1Q9UK53 422 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-207ENST00000475558 IKZF2Q9UKS7 526 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF281Q9Y2X9 895 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 NINQ8N4C6 2090 aa6.17□□□□□ -1.42
SHQ1-207ENST00000475558 PRRC2AP48634 2157 aaKnown RBP6.17□□□□□ -1.42
SHQ1-207ENST00000475558 TRBV2A0A0J9YWF9 115 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 MEGF11A6BM72 1044 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 OR6C6A6NF89 314 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 TVP23AA6NH52 213 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 TRIM64BA6NI03 449 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 FAM171A2A8MVW0 826 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF879B4DU55 563 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF878C9JN71 531 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 H7C1C5 153 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 MTRF1O75570 445 aaKnown RBP6.16□□□□□ -1.42
SHQ1-207ENST00000475558 WISP2O76076 250 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 UBL3O95164 117 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 TGM6O95932 706 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 ISG15P05161 165 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 TPOP07202 933 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 MRPL3P09001 348 aaKnown RBP6.16□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF16P17020 682 aaPredicted RBP6.16□□□□□ -1.42
SHQ1-207ENST00000475558 HOXB4P17483 251 aaPredicted RBP6.16□□□□□ -1.42
SHQ1-207ENST00000475558 CFL1P23528 166 aaKnown RBP6.16□□□□□ -1.42
SHQ1-207ENST00000475558 EDNRAP25101 427 aa6.16□□□□□ -1.42
SHQ1-207ENST00000475558 HSD11B1P28845 292 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms