RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 SRA1Q9HD15 236 aaKnown RBP10.39□□□□□ -0.75
SSR1-205ENST00000475213 TUBG2Q9NRH3 451 aa10.39□□□□□ -0.75
SSR1-205ENST00000475213 HIF1ANQ9NWT6 349 aa10.39□□□□□ -0.75
SSR1-205ENST00000475213 ACTR3BQ9P1U1 418 aa10.39□□□□□ -0.75
SSR1-205ENST00000475213 ATPIF1Q9UII2 106 aa10.39□□□□□ -0.75
SSR1-205ENST00000475213 PURGQ9UJV8 347 aaKnown RBP10.39□□□□□ -0.75
SSR1-205ENST00000475213 ZDHHC8Q9ULC8 765 aa10.39□□□□□ -0.75
SSR1-205ENST00000475213 POLR1DQ9Y2S0 133 aa10.39□□□□□ -0.75
SSR1-205ENST00000475213 WIPI2Q9Y4P8 454 aa10.39□□□□□ -0.75
SSR1-205ENST00000475213 LYVE1Q9Y5Y7 322 aa10.39□□□□□ -0.75
SSR1-205ENST00000475213 LHFPL6Q9Y693 200 aa10.39□□□□□ -0.75
SSR1-205ENST00000475213 TCRBV5S2A0A599 114 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 OR6C68A6NDL8 312 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 TNFRSF11BO00300 401 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 IDH3BO43837 385 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 UBOX5O94941 541 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 CD55P08174 381 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 KITLGP21583 273 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 PCMT1P22061 227 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 NOS3P29474 1203 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 SRP14P37108 136 aaKnown RBP10.38□□□□□ -0.75
SSR1-205ENST00000475213 MAGEA2P43356 314 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 HIST1H3AP68431 136 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 SRSF2Q01130 221 aaKnown RBP10.38□□□□□ -0.75
SSR1-205ENST00000475213 CDK5R2Q13319 367 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 ZMAT1Q5H9K5 638 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 HIST2H3PS2Q5TEC6 136 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 PGM2L1Q6PCE3 622 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 CORO6Q6QEF8 472 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 RINLQ6ZS11 566 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 HIST2H3AQ71DI3 136 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 ZBTB46Q86UZ6 589 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 ARHGAP24Q8N264 748 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 SDR9C7Q8NEX9 313 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 GJC3Q8NFK1 279 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 OR9Q2Q8NGE9 314 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 OR51F2Q8NH61 342 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 PTP4A1Q93096 173 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 HAVCR1Q96D42 359 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 CMBLQ96DG6 245 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 TIMD4Q96H15 378 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 COG8Q96MW5 612 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 DCLRE1CQ96SD1 692 aaKnown RBP10.38□□□□□ -0.75
SSR1-205ENST00000475213 BTBD10Q9BSF8 475 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 FN3KQ9H479 309 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 EGLN3Q9H6Z9 239 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 ZNF665Q9H7R5 613 aa10.38□□□□□ -0.75
SSR1-205ENST00000475213 RPRD1BQ9NQG5 326 aaKnown RBP10.38□□□□□ -0.75
SSR1-205ENST00000475213 DEAF1O75398 565 aaPredicted RBP10.37□□□□□ -0.75
SSR1-205ENST00000475213 FAM107AO95990 144 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 ERFP50548 548 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 TNFAIP6P98066 277 aaPredicted RBP10.37□□□□□ -0.75
SSR1-205ENST00000475213 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.37□□□□□ -0.75
SSR1-205ENST00000475213 COX10Q12887 443 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 HNRNPA0Q13151 305 aaKnown RBP10.37□□□□□ -0.75
SSR1-205ENST00000475213 KRTAP24-1Q3LI83 254 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 CLEC12AQ5QGZ9 265 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 SLC35F1Q5T1Q4 408 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 LCN8Q6JVE9 175 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 Q6ZR03 302 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 DHFR2Q86XF0 187 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 SLC26A10Q8NG04 563 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 OR52E2Q8NGJ4 325 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 OR4C15Q8NGM1 316 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 RAB1CQ92928 201 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 COQ7Q99807 217 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 TRIM15Q9C019 465 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 HDHD2Q9H0R4 259 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 MUC13Q9H3R2 512 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 CDH10Q9Y6N8 788 aa10.37□□□□□ -0.75
SSR1-205ENST00000475213 TRAV20A0A0B4J274 112 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 J3QW42 95 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 BHLHE40O14503 412 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 CCNB2O95067 398 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 GASTP01350 101 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 IGHV2-5P01817 119 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 T-ENOLP0DO92 83 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 ANPEPP15144 967 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 RAC2P15153 192 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 CALB2P22676 271 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 RGS6P49758 472 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 MS4A2Q01362 244 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 SLC3A1Q07837 685 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 PPP1R8Q12972 351 aaKnown RBP10.36□□□□□ -0.75
SSR1-205ENST00000475213 TRIM25Q14258 630 aaKnown RBP10.36□□□□□ -0.75
SSR1-205ENST00000475213 HLXQ14774 488 aaPredicted RBP10.36□□□□□ -0.75
SSR1-205ENST00000475213 RSPO1Q2MKA7 263 aaPredicted RBP10.36□□□□□ -0.75
SSR1-205ENST00000475213 ZNF770Q6IQ21 691 aaPredicted RBP10.36□□□□□ -0.75
SSR1-205ENST00000475213 SLC18B1Q6NT16 456 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 ACSM5Q6NUN0 579 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 RPL13AP3Q6NVV1 102 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 FBXW12Q6X9E4 464 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 CFAP77Q6ZQR2 320 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 LINC00346Q8IVM7 164 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 LINC00471Q8N535 108 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 CCDC197Q8NCU1 140 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 OR2Z1Q8NG97 314 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 OR52L1Q8NGH7 329 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 OR5L1Q8NGL2 311 aa10.36□□□□□ -0.75
SSR1-205ENST00000475213 RAB39BQ96DA2 213 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms