RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 MAP6Q96JE9 813 aa14.07□□□□□ -0.16
ATG4B-216ENST00000475195 MARCH7Q9H992 704 aa14.07□□□□□ -0.16
ATG4B-216ENST00000475195 SLC25A19Q9HC21 320 aa14.07□□□□□ -0.16
ATG4B-216ENST00000475195 HINT3Q9NQE9 182 aaKnown RBP14.07□□□□□ -0.16
ATG4B-216ENST00000475195 GRIP1Q9Y3R0 1128 aa14.07□□□□□ -0.16
ATG4B-216ENST00000475195 A0A1W2PPW3 197 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 RIIAD1A6NNX1 92 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 G3V2T6 193 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 CIB2O75838 187 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 HLA-DQA2P01906 255 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 ADH4P08319 380 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 DBHP09172 617 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 CLUP10909 449 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 NAT2P11245 290 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 FCGR1AP12314 374 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 ZNF823P16415 610 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 POU1F1P28069 291 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 FMO3P31513 532 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 LIPAP38571 399 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 NR4A2P43354 598 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 CRISP1P54107 249 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 PSG7Q13046 419 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 RIN1Q13671 783 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 PCGF3Q3KNV8 242 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 LINC00346Q8IVM7 164 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 OR51L1Q8NGJ5 315 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 LRTOMTQ8WZ04 291 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 HAVCR1Q96D42 359 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 HCAR1Q9BXC0 346 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 C1QTNF5Q9BXJ0 243 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 GABARAPL1Q9H0R8 117 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 TPK1Q9H3S4 243 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 WDR76Q9H967 626 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 PAPOLBQ9NRJ5 636 aaKnown RBP14.06□□□□□ -0.16
ATG4B-216ENST00000475195 POLR1DQ9Y2S0 133 aa14.06□□□□□ -0.16
ATG4B-216ENST00000475195 TVP23AA6NH52 213 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 HPXP02790 462 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 GYPBP06028 91 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 KITLGP21583 273 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 ESRRGP62508 458 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 NKPD1Q17RQ9 610 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 SPATA46Q5T0L3 261 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 KDM4DQ6B0I6 523 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 FBXW12Q6X9E4 464 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.05□□□□□ -0.16
ATG4B-216ENST00000475195 AMIGO2Q86SJ2 522 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 ZDHHC13Q8IUH4 622 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 ZNF511Q8NB15 262 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 MAPK1IP1LQ8NDC0 245 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 ICA1LQ8NDH6 482 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 OR10S1Q8NGN2 331 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 APOBEC3DQ96AK3 386 aaPredicted RBP14.05□□□□□ -0.16
ATG4B-216ENST00000475195 CENPNQ96H22 339 aaPredicted RBP14.05□□□□□ -0.16
ATG4B-216ENST00000475195 CYSLTR2Q9NS75 346 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 DDX28Q9NUL7 540 aaKnown RBP14.05□□□□□ -0.16
ATG4B-216ENST00000475195 CGGBP1Q9UFW8 167 aaPredicted RBP14.05□□□□□ -0.16
ATG4B-216ENST00000475195 COMMD3-BMI1R4GMX3 469 aa14.05□□□□□ -0.16
ATG4B-216ENST00000475195 ABCA1O95477 2261 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 FAM183AA6NL82 134 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 ZNF593O00488 134 aaPredicted RBP14.04□□□□□ -0.16
ATG4B-216ENST00000475195 GLCEO94923 617 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 ACSM4P0C7M7 580 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 PSKH1P11801 424 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 USF1P22415 310 aaPredicted RBP14.04□□□□□ -0.16
ATG4B-216ENST00000475195 COL8A2P25067 703 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 OTX1P32242 354 aaPredicted RBP14.04□□□□□ -0.16
ATG4B-216ENST00000475195 MAGEB1P43366 347 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 ENTPD1P49961 510 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 EFNB1P98172 346 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 PTGES3Q15185 160 aaKnown RBP14.04□□□□□ -0.16
ATG4B-216ENST00000475195 LYPD4Q6UWN0 246 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 RHOUQ7L0Q8 258 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 OR5L1Q8NGL2 311 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 SNX33Q8WV41 574 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 RDH5Q92781 318 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 PITX2Q99697 317 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 ATF6BQ99941 703 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 PIMREGQ9BSJ6 248 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 POFUT1Q9H488 388 aa14.04□□□□□ -0.16
ATG4B-216ENST00000475195 PRR23D1E9PI22 279 aaPredicted RBP14.03□□□□□ -0.16
ATG4B-216ENST00000475195 NCR1O76036 304 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 MT-ND5P03915 603 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 TACSTD2P09758 323 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 PRR23D2P0DMB1 279 aaPredicted RBP14.03□□□□□ -0.16
ATG4B-216ENST00000475195 RAC2P15153 192 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 RPS27P42677 84 aaKnown RBP14.03□□□□□ -0.16
ATG4B-216ENST00000475195 CRYBB2P43320 205 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 ZNF81P51508 661 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 RIPPLY3P57055 190 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 TMEM33P57088 247 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 CDK5R2Q13319 367 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 ALKBH6Q3KRA9 238 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 FAM209AQ5JX71 171 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 TMEM236Q5W0B7 351 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 TMEM154Q6P9G4 183 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 TIGD4Q8IY51 512 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 ST7LQ8TDW4 575 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 CMBLQ96DG6 245 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 DIRC2Q96SL1 478 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 OSBPL10Q9BXB5 764 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms