RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SBK2P0C263 348 aa17.2■□□□□ 0.34
PDLIM4-206ENST00000474421 PPIAL4FP0DN26 164 aa17.2■□□□□ 0.34
PDLIM4-206ENST00000474421 FPR3P25089 353 aa17.2■□□□□ 0.34
PDLIM4-206ENST00000474421 FBXW12Q6X9E4 464 aa17.2■□□□□ 0.34
PDLIM4-206ENST00000474421 PGAM4Q8N0Y7 254 aa17.2■□□□□ 0.34
PDLIM4-206ENST00000474421 KLHL36Q8N4N3 616 aa17.2■□□□□ 0.34
PDLIM4-206ENST00000474421 NSMCE2Q96MF7 247 aa17.2■□□□□ 0.34
PDLIM4-206ENST00000474421 GPA33Q99795 319 aa17.2■□□□□ 0.34
PDLIM4-206ENST00000474421 PPP1R3CQ9UQK1 317 aa17.2■□□□□ 0.34
PDLIM4-206ENST00000474421 V9GYQ6 96 aa17.2■□□□□ 0.34
PDLIM4-206ENST00000474421 OR10H3O60404 316 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 AVPP01185 164 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 SEMG1P04279 462 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 SPATS1Q496A3 300 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 TMEM155Q4W5P6 130 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 SPRNQ5BIV9 151 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 LEG1Q6P5S2 330 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 Q6ZR03 302 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 SUCNR1Q9BXA5 334 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 OR52D1Q9H346 318 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 C7orf69Q9H7B7 122 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 NDE1Q9NXR1 346 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 TMCC3Q9ULS5 477 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 B9D1Q9UPM9 204 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 ARHGAP32A7KAX9 2087 aa17.19■□□□□ 0.34
PDLIM4-206ENST00000474421 IGLV1-36A0A0B4J1U3 117 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 IDH3BO43837 385 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 FABP3P05413 133 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 DBHP09172 617 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 NOS3P29474 1203 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 HILS1P60008 231 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 BTG1P62324 171 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 HIST1H3AP68431 136 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 LCN2P80188 198 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 COX10Q12887 443 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 SLC36A3Q495N2 470 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 HIST2H3PS2Q5TEC6 136 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 OTPQ5XKR4 325 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 HIST2H3AQ71DI3 136 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 ZNF771Q7L3S4 317 aaPredicted RBP17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 ATG16L2Q8NAA4 619 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 OR13G1Q8NGZ3 307 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 ITLN1Q8WWA0 313 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 TSSK2Q96PF2 358 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 OR2V2Q96R30 315 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 IFT27Q9BW83 186 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 SRA1Q9HD15 236 aaKnown RBP17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 LHFPL6Q9Y693 200 aa17.18■□□□□ 0.34
PDLIM4-206ENST00000474421 TRIM77I1YAP6 450 aa17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 DCTN6O00399 190 aa17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 ECH1Q13011 328 aa17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 C12orf54Q6X4T0 127 aa17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 LRRC28Q86X40 367 aaPredicted RBP17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 OR6V1Q8N148 313 aa17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 MUC20Q8N307 709 aaPredicted RBP17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 OR8G5Q8NG78 346 aa17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 ZNF582Q96NG8 517 aaPredicted RBP17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 CDRT15Q96T59 188 aa17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 NMNAT3Q96T66 252 aa17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 PATZ1Q9HBE1 687 aaKnown RBP17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 IL1RAPQ9NPH3 570 aa17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 PTTG3PQ9NZH4 202 aa17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 CD300AQ9UGN4 299 aa17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 TAGLN3Q9UI15 199 aa17.17■□□□□ 0.34
PDLIM4-206ENST00000474421 ARPC2O15144 300 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 HIST1H1CP16403 213 aaKnown RBP17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 SELEP16581 610 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 CPT2P23786 658 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 MDH2P40926 338 aaKnown RBP17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 SRP9P49458 86 aaKnown RBP17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 HLXQ14774 488 aaPredicted RBP17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 MEP1BQ16820 701 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 C16orf89Q6UX73 402 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 ZBTB46Q86UZ6 589 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 OR5AS1Q8N127 324 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 BPIFB2Q8N4F0 458 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 SLC26A10Q8NG04 563 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 OR4K13Q8NH42 304 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 GNPDA2Q8TDQ7 276 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 FAM216AQ8WUB2 273 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 RBM4Q9BWF3 364 aaKnown RBP17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 CDADC1Q9BWV3 514 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 HCAR1Q9BXC0 346 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 DCAF16Q9NXF7 216 aa17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 POLR3KQ9Y2Y1 108 aaPredicted RBP17.16■□□□□ 0.34
PDLIM4-206ENST00000474421 KRT36O76013 467 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 GPANK1O95872 356 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 ADRA2CP18825 462 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 FPR2P25090 351 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 RRM2P31350 389 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 GSSP48637 474 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 ERFP50548 548 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 ACTG1P63261 375 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 TSPAN31Q12999 210 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 OR2T2Q6IF00 324 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 RPL13AP3Q6NVV1 102 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 CORO6Q6QEF8 472 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 OR2AJ1Q8NGZ0 328 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms