RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 ACSM4P0C7M7 580 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 CD46P15529 392 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 HSD11B1P28845 292 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 RFX2P48378 723 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 CCR9P51686 369 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 FOXG1P55316 489 aaPredicted RBP5.49□□□□□ -1.53
CLK1-210ENST00000473565 SPOCK1Q08629 439 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 ENDOGQ14249 297 aaKnown RBP5.49□□□□□ -1.53
CLK1-210ENST00000473565 POU4F3Q15319 338 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 ABLIM2Q6H8Q1 611 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 METAP1DQ6UB28 335 aaPredicted RBP5.49□□□□□ -1.53
CLK1-210ENST00000473565 CCBE1Q6UXH8 406 aaPredicted RBP5.49□□□□□ -1.53
CLK1-210ENST00000473565 OR13C3Q8NGS6 347 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 OR51E1Q8TCB6 317 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 ACOT12Q8WYK0 555 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 CCDC32Q9BV29 185 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 PBOV1Q9GZY1 135 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 EXO5Q9H790 373 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 CALHM2Q9HA72 323 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 CYSLTR2Q9NS75 346 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 KLF13Q9Y2Y9 288 aaPredicted RBP5.49□□□□□ -1.53
CLK1-210ENST00000473565 V9GY05 133 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 F5H5K5 113 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 CFL1P23528 166 aaKnown RBP5.49□□□□□ -1.53
CLK1-210ENST00000473565 TNFSF10P50591 281 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 ZNF121P58317 390 aaPredicted RBP5.49□□□□□ -1.53
CLK1-210ENST00000473565 KLHL24Q6TFL4 600 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 FAM57BQ71RH2 274 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 RNF144BQ7Z419 303 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 HDDC2Q7Z4H3 204 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 LRRC28Q86X40 367 aaPredicted RBP5.49□□□□□ -1.53
CLK1-210ENST00000473565 COMMD2Q86X83 199 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 C20orf196Q8IYI0 205 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 CMTM4Q8IZR5 234 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 FGFBP3Q8TAT2 258 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 SLC25A38Q96DW6 304 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 FBXO17Q96EF6 278 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 B3GNT4Q9C0J1 378 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 C11orf54Q9H0W9 315 aaPredicted RBP5.49□□□□□ -1.53
CLK1-210ENST00000473565 MMP28Q9H239 520 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 LDAHQ9H6V9 325 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 SPRR3Q9UBC9 169 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 OR5V1Q9UGF6 321 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 KLK13Q9UKR3 277 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 MED12LQ86YW9 2145 aa5.49□□□□□ -1.53
CLK1-210ENST00000473565 ISPDA4D126 451 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 ZNF878C9JN71 531 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 KLRC4-KLRK1H3BQV0 150 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 BOLA2-SMG1P6H3BVE0 249 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 AIPO00170 330 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 TFECO14948 347 aaPredicted RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 PLA2G10O15496 165 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 EEF1E1O43324 174 aaKnown RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 SLC19A2O60779 497 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 ITGA5P08648 1049 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 CD3GP09693 182 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 ZNF708P17019 499 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 NPR2P20594 1047 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 MSR1P21757 451 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 MAPK3P27361 379 aaPredicted RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 CX3CR1P49238 355 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 SRP9P49458 86 aaKnown RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 BCAP31P51572 246 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 EFNB2P52799 333 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 RRADP55042 308 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 SOX8P57073 446 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 CDC20Q12834 499 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 MRPL28Q13084 256 aaKnown RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 CEACAM16Q2WEN9 425 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 C10orf128Q5T292 105 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 SFRP5Q5T4F7 317 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 TSPO2Q5TGU0 170 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 ASB18Q6ZVZ8 466 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 LUZP2Q86TE4 346 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 TUSC5Q8IXB3 177 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 CADM3Q8N126 398 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 ZNF283Q8N7M2 679 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 OR8B12Q8NGG6 310 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 FGGYQ96C11 551 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 KCTD12Q96CX2 325 aaKnown RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 FAM71F1Q96KD3 344 aaPredicted RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 WACQ9BTA9 647 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 MFRPQ9BY79 579 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 SLITRK2Q9H156 845 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 NELFAQ9H3P2 528 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 ZCCHC4Q9H5U6 513 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 HHLA2Q9UM44 414 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 MRPS18CQ9Y3D5 142 aaKnown RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 PCDHGA9Q9Y5G4 932 aaKnown RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 PRR14LQ5THK1 2151 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 CYTIPO60759 359 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 TALDO1P37837 337 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 GUCA1AP43080 201 aaPredicted RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 SLC6A9P48067 706 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 DGCR2P98153 550 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 SLC10A1Q14973 349 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 TRIQKQ629K1 86 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 GPR137CQ8N3F9 429 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 GDPD1Q8N9F7 314 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 ZFP62Q8NB50 900 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms