RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 RRM2P31350 389 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 AQP2P41181 271 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 NAA10P41227 235 aaPredicted RBP4.09□□□□□ -1.75
SEC22A-204ENST00000473494 SYKP43405 635 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 SLC11A1P49279 550 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 RORCP51449 518 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 RAB10P61026 200 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 RPS15P62841 145 aaKnown RBP4.09□□□□□ -1.75
SEC22A-204ENST00000473494 DNAJC3Q13217 504 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 AQP6Q13520 282 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 GUCA2BQ16661 112 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 H2AFVQ71UI9 128 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 ZNF429Q86V71 674 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 OFCC1Q8IZS5 231 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 OR10R2Q8NGX6 335 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 RNF138Q8WVD3 245 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 ANP32BQ92688 251 aaKnown RBP4.09□□□□□ -1.75
SEC22A-204ENST00000473494 ISG20Q96AZ6 181 aaKnown RBP4.09□□□□□ -1.75
SEC22A-204ENST00000473494 TMIGD2Q96BF3 282 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 LRRC39Q96DD0 335 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 AURKBQ96GD4 344 aaPredicted RBP4.09□□□□□ -1.75
SEC22A-204ENST00000473494 ATP5SQ99766 215 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 C11orf70Q9BRQ4 267 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 DNTTIP1Q9H147 329 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 CLMPQ9H6B4 373 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 FGF20Q9NP95 211 aaPredicted RBP4.09□□□□□ -1.75
SEC22A-204ENST00000473494 ZNF226Q9NYT6 803 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 ING4Q9UNL4 249 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 STK38LQ9Y2H1 464 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 CNTNAP1P78357 1384 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 RTL9Q8NET4 1388 aa4.09□□□□□ -1.75
SEC22A-204ENST00000473494 PPP1R2P9O14990 202 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 NVLO15381 856 aaKnown RBP4.08□□□□□ -1.76
SEC22A-204ENST00000473494 CLOCKO15516 846 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 C6orf47O95873 294 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 OR8G3PP0DMU2 310 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 SMIM10L1P0DMW3 83 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 FOLR1P15328 257 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 MGMTP16455 207 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 FOXN2P32314 431 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 SCN4AP35499 1836 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 SERPINB5P36952 375 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 ZNF133P52736 654 aaPredicted RBP4.08□□□□□ -1.76
SEC22A-204ENST00000473494 CRISP3P54108 245 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 LIPEQ05469 1076 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 MAB21L1Q13394 359 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 ZNF658BQ4V348 819 aaPredicted RBP4.08□□□□□ -1.76
SEC22A-204ENST00000473494 LY6G6FQ5SQ64 297 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 C9orf135Q5VTT2 229 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 CYB5R2Q6BCY4 276 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 SCD5Q86SK9 330 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 BPIFCQ8NFQ6 507 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 CCDC126Q96EE4 140 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 RNF185Q96GF1 192 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 SMIM10Q96HG1 83 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 TSNARE1Q96NA8 513 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 DMAP1Q9NPF5 467 aaPredicted RBP4.08□□□□□ -1.76
SEC22A-204ENST00000473494 GPATCH2LQ9NWQ4 482 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 HEBP2Q9Y5Z4 205 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 F11RQ9Y624 299 aaKnown RBP4.08□□□□□ -1.76
SEC22A-204ENST00000473494 PCNTO95613 3336 aa4.08□□□□□ -1.76
SEC22A-204ENST00000473494 PSME4Q14997 1843 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 IGKV6D-41A0A0C4DH26 115 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 A6NDX4 124 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 ZNF879B4DU55 563 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 DFNA5O60443 496 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 CDH16O75309 829 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 OR2F2O95006 317 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 ZNF24P17028 368 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 LONP1P36776 959 aaKnown RBP4.07□□□□□ -1.76
SEC22A-204ENST00000473494 NUP62P37198 522 aaPredicted RBP4.07□□□□□ -1.76
SEC22A-204ENST00000473494 RFX3P48380 749 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 TMED10P49755 219 aaKnown RBP4.07□□□□□ -1.76
SEC22A-204ENST00000473494 TRDNQ13061 729 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 KLHL40Q2TBA0 621 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 ALKBH6Q3KRA9 238 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 NKAIN1Q4KMZ8 207 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 CCDC122Q5T0U0 273 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 PIP5KL1Q5T9C9 394 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 TTC19Q6DKK2 380 aaPredicted RBP4.07□□□□□ -1.76
SEC22A-204ENST00000473494 LYPD2Q6UXB3 125 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 BZW1Q7L1Q6 419 aaKnown RBP4.07□□□□□ -1.76
SEC22A-204ENST00000473494 SPATA24Q86W54 205 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 IQCKQ8N0W5 287 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 LIX1Q8N485 282 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 COMMD1Q8N668 190 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 ZNF433Q8N7K0 673 aaPredicted RBP4.07□□□□□ -1.76
SEC22A-204ENST00000473494 Q8N9W7 124 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 HSD17B11Q8NBQ5 300 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 CD300LFQ8TDQ1 290 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 CXorf40AQ8TE69 158 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.07□□□□□ -1.761e-6■■■■■ 56.2
SEC22A-204ENST00000473494 ITFG2Q969R8 447 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 PIK3IP1Q96FE7 263 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 SLC29A1Q99808 456 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 GABARAPL3Q9BY60 117 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 MRPL37Q9BZE1 423 aaKnown RBP4.07□□□□□ -1.76
SEC22A-204ENST00000473494 OR51M1Q9H341 326 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 TDRD3Q9H7E2 651 aaKnown RBP4.07□□□□□ -1.76
SEC22A-204ENST00000473494 PITPNC1Q9UKF7 332 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms