RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 NGFP01138 241 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 IGHV4-39P01824 125 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 DBHP09172 617 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 ZNF3P17036 446 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 GLRXP35754 106 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 SERPINF1P36955 418 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 BLVRAP53004 296 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 ADARB1P78563 741 aaKnown RBP11.27□□□□□ -0.61
TPM3-216ENST00000473036 EFNB1P98172 346 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 MED21Q13503 144 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 AQP6Q13520 282 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 SNAPC1Q16533 368 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 KRTAP27-1Q3LI81 207 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 Q5PR19 223 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 SLC25A30Q5SVS4 291 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 AGAP6Q5VW22 663 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 MEDAGQ5VYS4 303 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 RFPL4BQ6ZWI9 263 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 FBXL14Q8N1E6 418 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 ZCCHC24Q8N2G6 241 aaKnown RBP11.27□□□□□ -0.61
TPM3-216ENST00000473036 OR10S1Q8NGN2 331 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 RFKQ969G6 155 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 MAP6Q96JE9 813 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 DOK1Q99704 481 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 KCNS3Q9BQ31 491 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 CACNG6Q9BXT2 260 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 MRPL37Q9BZE1 423 aaKnown RBP11.27□□□□□ -0.61
TPM3-216ENST00000473036 KCNN2Q9H2S1 579 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 H2AFY2Q9P0M6 372 aaPredicted RBP11.27□□□□□ -0.61
TPM3-216ENST00000473036 FBXL3Q9UKT7 428 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 IQCMA0A1B0GVH7 501 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 DLGAP1O14490 977 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 SGCEO43556 437 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 DENRO43583 198 aaKnown RBP11.26□□□□□ -0.61
TPM3-216ENST00000473036 PRKYO43930 277 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 DOK2O60496 412 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 LY6HO94772 140 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 CLPTM1O96005 669 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 CCNOP22674 350 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 SLC2A5P22732 501 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 UCP2P55851 309 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 PCBD1P61457 104 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 SNRPGP62308 76 aaKnown RBP11.26□□□□□ -0.61
TPM3-216ENST00000473036 GLO1Q04760 184 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 PLP2Q04941 152 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 TMED1Q13445 227 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 EFNB3Q15768 340 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 TBC1D28Q2M2D7 210 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 C12orf73Q69YU5 71 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 PLBD1Q6P4A8 553 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 DNM1P34Q6PK57 102 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 BCDIN3DQ7Z5W3 292 aaKnown RBP11.26□□□□□ -0.61
TPM3-216ENST00000473036 PROKR2Q8NFJ6 384 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 OR2T4Q8NH00 348 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 MBOAT4Q96T53 435 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 ANKRD60Q9BZ19 345 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 PLK3Q9H4B4 646 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 COMMD3-BMI1R4GMX3 469 aa11.26□□□□□ -0.61
TPM3-216ENST00000473036 H7C1Q1 480 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 ICMTO60725 284 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 TMCC2O75069 709 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 PCSK6P29122 969 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 APLNRP35414 380 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 GUCA1AP43080 201 aaPredicted RBP11.25□□□□□ -0.61
TPM3-216ENST00000473036 SCRN3Q0VDG4 424 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 PCK2Q16822 640 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 DNM1P46Q6ZS02 220 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 THAP5Q7Z6K1 395 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 CPOQ8IVL8 374 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 GID4Q8IVV7 300 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 OR1F12Q8NHA8 337 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 FAM81AQ8TBF8 368 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 MRPL24Q96A35 216 aaKnown RBP11.25□□□□□ -0.61
TPM3-216ENST00000473036 MYCBPQ99417 103 aaPredicted RBP11.25□□□□□ -0.61
TPM3-216ENST00000473036 SYT3Q9BQG1 590 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 WACQ9BTA9 647 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 C1orf198Q9H425 327 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 CXorf56Q9H5V9 222 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 CDH20Q9HBT6 801 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 FAIMQ9NVQ4 179 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 CLN6Q9NWW5 311 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 TVP23BQ9NYZ1 205 aa11.25□□□□□ -0.61
TPM3-216ENST00000473036 CCDC182A6NF36 153 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 B9A039 149 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 PRR23D1E9PI22 279 aaPredicted RBP11.24□□□□□ -0.61
TPM3-216ENST00000473036 PTHP01270 115 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 HLA-DQA2P01906 255 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 PRR23D2P0DMB1 279 aaPredicted RBP11.24□□□□□ -0.61
TPM3-216ENST00000473036 COX5BP10606 129 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 ZNF250P15622 560 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 MYF6P23409 242 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 MPV17P39210 176 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 HTR5AP47898 357 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 GDI2P50395 445 aaKnown RBP11.24□□□□□ -0.61
TPM3-216ENST00000473036 ATP5J2P56134 94 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 GALK2Q01415 458 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 MAD2L1BPQ15013 274 aaPredicted RBP11.24□□□□□ -0.61
TPM3-216ENST00000473036 OCLNQ16625 522 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 SPATA46Q5T0L3 261 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 ZNF691Q5VV52 312 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms