RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 KITP10721 976 aa15.68■□□□□ 0.1
SORT1-203ENST00000471996 GPX2P18283 190 aa15.68■□□□□ 0.1
SORT1-203ENST00000471996 LAPTM4AQ15012 233 aa15.68■□□□□ 0.1
SORT1-203ENST00000471996 C1orf94Q6P1W5 598 aa15.68■□□□□ 0.1
SORT1-203ENST00000471996 C19orf18Q8NEA5 215 aa15.68■□□□□ 0.1
SORT1-203ENST00000471996 PFN4Q8NHR9 129 aa15.68■□□□□ 0.1
SORT1-203ENST00000471996 ZNF582Q96NG8 517 aaPredicted RBP15.68■□□□□ 0.1
SORT1-203ENST00000471996 PCDHAC1Q9H158 963 aa15.68■□□□□ 0.1
SORT1-203ENST00000471996 SSU72Q9NP77 194 aaKnown RBP15.68■□□□□ 0.1
SORT1-203ENST00000471996 POLE4Q9NR33 117 aa15.68■□□□□ 0.1
SORT1-203ENST00000471996 CTSZQ9UBR2 303 aa15.68■□□□□ 0.1
SORT1-203ENST00000471996 TMCC3Q9ULS5 477 aa15.68■□□□□ 0.1
SORT1-203ENST00000471996 XPNPEP2O43895 674 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 OPN1SWP03999 348 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 VIMP08670 466 aaKnown RBP15.67■□□□□ 0.1
SORT1-203ENST00000471996 GATA4P43694 442 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 ARF6P62330 175 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 SCRN3Q0VDG4 424 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 DBPQ10586 325 aaPredicted RBP15.67■□□□□ 0.1
SORT1-203ENST00000471996 C11orf87Q6NUJ2 197 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 FBXW12Q6X9E4 464 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 PDZD9Q8IXQ8 264 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 PCYOX1LQ8NBM8 494 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 Q8TCH9 128 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 LIPHQ8WWY8 451 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 CFHR4Q92496 578 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 SGTBQ96EQ0 304 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 ZNRD1Q9P1U0 126 aa15.67■□□□□ 0.1
SORT1-203ENST00000471996 J3QW42 95 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 M0QX08 132 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 SGCEO43556 437 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 IGF2P01344 180 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 FBP1P09467 338 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 GABRA5P31644 462 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 TOP3AQ13472 1001 aaPredicted RBP15.66■□□□□ 0.1
SORT1-203ENST00000471996 MPP2Q14168 576 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 C11orf44Q8N8P7 122 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 SLC7A6Q92536 515 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 OR52B2Q96RD2 323 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 MMADHCQ9H3L0 296 aaPredicted RBP15.66■□□□□ 0.1
SORT1-203ENST00000471996 EMC7Q9NPA0 242 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 C20orf141Q9NUB4 165 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 PTTG3PQ9NZH4 202 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 CORO2BQ9UQ03 480 aa15.66■□□□□ 0.1
SORT1-203ENST00000471996 TRBV5-3A0A0A0MS03 114 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 A0A1B0GWJ7 208 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 CD247P20963 164 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 RPL27P61353 136 aaKnown RBP15.65■□□□□ 0.1
SORT1-203ENST00000471996 ALG10Q5BKT4 473 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 PAGE3Q5JUK9 113 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 IGFN1Q86VF2 1251 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 OR5L1Q8NGL2 311 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 OR11L1Q8NGX0 322 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 ERGIC1Q969X5 290 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 PHF21AQ96BD5 680 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 RASD2Q96D21 266 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 THAP1Q9NVV9 213 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 FOXJ3Q9UPW0 622 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 CAB39Q9Y376 341 aaPredicted RBP15.65■□□□□ 0.1
SORT1-203ENST00000471996 TENM3Q9P273 2699 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 NOTCH3Q9UM47 2321 aa15.65■□□□□ 0.1
SORT1-203ENST00000471996 ANKRD61A6NGH8 418 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 IQCF6A8MYZ5 107 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 EVPLLA8MZ36 301 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 RNASEK-C17orf49H0YIS7 233 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 SNNO75324 88 aaPredicted RBP15.64■□□□□ 0.09
SORT1-203ENST00000471996 RBM34P42696 430 aaKnown RBP15.64■□□□□ 0.09
SORT1-203ENST00000471996 EFNB2P52799 333 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 MAB21L1Q13394 359 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 KCNJ8Q15842 424 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 CLEC12AQ5QGZ9 265 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 NKAIN4Q8IVV8 208 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 CELF2-AS1Q8N7Q2 184 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 BHLHE23Q8NDY6 225 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 NPRL2Q8WTW4 380 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 TMEM109Q9BVC6 243 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 SEMA6AQ9H2E6 1030 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 TOR3AQ9H497 397 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 SMURF1Q9HCE7 757 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 TMEM100Q9NV29 134 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 SIGLEC9Q9Y336 463 aa15.64■□□□□ 0.09
SORT1-203ENST00000471996 ADAM20O43506 726 aa15.63■□□□□ 0.09
SORT1-203ENST00000471996 FAM20BO75063 409 aa15.63■□□□□ 0.09
SORT1-203ENST00000471996 HLA-DPB1P04440 258 aa15.63■□□□□ 0.09
SORT1-203ENST00000471996 FPR3P25089 353 aa15.63■□□□□ 0.09
SORT1-203ENST00000471996 RGS6P49758 472 aa15.63■□□□□ 0.09
SORT1-203ENST00000471996 HOXA4Q00056 320 aaPredicted RBP15.63■□□□□ 0.09
SORT1-203ENST00000471996 C11orf88Q6PI97 169 aa15.63■□□□□ 0.09
SORT1-203ENST00000471996 MAVSQ7Z434 540 aa15.63■□□□□ 0.09
SORT1-203ENST00000471996 FUNDC1Q8IVP5 155 aa15.63■□□□□ 0.09
SORT1-203ENST00000471996 C11orf65Q8NCR3 313 aa15.63■□□□□ 0.09
SORT1-203ENST00000471996 TMEM255BQ8WV15 326 aa15.63■□□□□ 0.09
SORT1-203ENST00000471996 ITPKCQ96DU7 683 aa15.63■□□□□ 0.09
SORT1-203ENST00000471996 PAIP2Q9BPZ3 127 aaKnown RBP15.63■□□□□ 0.09
SORT1-203ENST00000471996 PPA2Q9H2U2 334 aa15.63■□□□□ 0.09
SORT1-203ENST00000471996 HIF3AQ9Y2N7 669 aa15.63■□□□□ 0.09
SORT1-203ENST00000471996 ELOVL7A1L3X0 281 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 OR6C6A6NF89 314 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 LGALS8O00214 317 aa15.62■□□□□ 0.09
SORT1-203ENST00000471996 RAD23AP54725 363 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms