RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 RAB1CQ92928 201 aa12.97□□□□□ -0.33
COL1A1-203ENST00000471344 RAB39BQ96DA2 213 aa12.97□□□□□ -0.33
COL1A1-203ENST00000471344 TIMD4Q96H15 378 aa12.97□□□□□ -0.33
COL1A1-203ENST00000471344 DCLRE1CQ96SD1 692 aaKnown RBP12.97□□□□□ -0.33
COL1A1-203ENST00000471344 IFT27Q9BW83 186 aa12.97□□□□□ -0.33
COL1A1-203ENST00000471344 OCEL1Q9H607 264 aa12.97□□□□□ -0.33
COL1A1-203ENST00000471344 EGLN3Q9H6Z9 239 aa12.97□□□□□ -0.33
COL1A1-203ENST00000471344 WDR76Q9H967 626 aa12.97□□□□□ -0.33
COL1A1-203ENST00000471344 KRCC1Q9NPI7 259 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-203ENST00000471344 RPRD1BQ9NQG5 326 aaKnown RBP12.97□□□□□ -0.33
COL1A1-203ENST00000471344 CGGBP1Q9UFW8 167 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-203ENST00000471344 METRNQ9UJH8 293 aa12.97□□□□□ -0.33
COL1A1-203ENST00000471344 ZDHHC8Q9ULC8 765 aa12.97□□□□□ -0.33
COL1A1-203ENST00000471344 B9D1Q9UPM9 204 aa12.97□□□□□ -0.33
COL1A1-203ENST00000471344 IGHV3-64DA0A0J9YX35 117 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 OR6C68A6NDL8 312 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 IGHV2-70P01814 119 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 PSKH1P11801 424 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 ANOS1P23352 680 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 SLC6A6P31641 620 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 LIPAP38571 399 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 SMIM11AP58511 58 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 LCN2P80188 198 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 PPP1R8Q12972 351 aaKnown RBP12.96□□□□□ -0.33
COL1A1-203ENST00000471344 CLEC12AQ5QGZ9 265 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 SLC35F1Q5T1Q4 408 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 OR2T2Q6IF00 324 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 SHQ1Q6PI26 577 aaKnown RBP12.96□□□□□ -0.33
COL1A1-203ENST00000471344 ZNF620Q6ZNG0 422 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 JAZF1Q86VZ6 243 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 ZDHHC21Q8IVQ6 265 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.96□□□□□ -0.33
COL1A1-203ENST00000471344 SEMA6DQ8NFY4 1073 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 SLC26A10Q8NG04 563 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 OR10AD1Q8NGE0 317 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 MCUR1Q96AQ8 359 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 HAVCR1Q96D42 359 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 NSL1Q96IY1 281 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 BTBD10Q9BSF8 475 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 IL1RAPQ9NPH3 570 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 TMEM106BQ9NUM4 274 aa12.96□□□□□ -0.33
COL1A1-203ENST00000471344 B2RBV5 119 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 H0YL77 283 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 ARPC3O15145 178 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 ZFP36P26651 326 aaKnown RBP12.95□□□□□ -0.34
COL1A1-203ENST00000471344 CRABP1P29762 137 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 RPS27P42677 84 aaKnown RBP12.95□□□□□ -0.34
COL1A1-203ENST00000471344 SEC61A1P61619 476 aaKnown RBP12.95□□□□□ -0.34
COL1A1-203ENST00000471344 MXRA7P84157 204 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 SPATS1Q496A3 300 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 ZMAT1Q5H9K5 638 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 LIPNQ5VXI9 398 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 SLC18B1Q6NT16 456 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 LYPD4Q6UWN0 246 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 BHLHE23Q8NDY6 225 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 OR8D4Q8NGM9 314 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 ZNRF4Q8WWF5 429 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 OR2V2Q96R30 315 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 SIGLEC11Q96RL6 698 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 DIRC2Q96SL1 478 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 PLA2G12AQ9BZM1 189 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 NDE1Q9NXR1 346 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 VNN3Q9NY84 501 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 LYVE1Q9Y5Y7 322 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 NPTNQ9Y639 398 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 WNK2Q9Y3S1 2297 aa12.95□□□□□ -0.34
COL1A1-203ENST00000471344 RENP00797 406 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 SBK2P0C263 348 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 SELEP16581 610 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 PYCR1P32322 319 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 COX10Q12887 443 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 TSPAN31Q12999 210 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 ZMYND11Q15326 602 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 KRTAP27-1Q3LI81 207 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 DCAF12L2Q5VW00 463 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 DNM1P34Q6PK57 102 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 C16orf89Q6UX73 402 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 TRPM8Q7Z2W7 1104 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 NAA40Q86UY6 237 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 ZBTB46Q86UZ6 589 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 ZNF283Q8N7M2 679 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 CYB561A3Q8NBI2 242 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 GJC3Q8NFK1 279 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 OR52E2Q8NGJ4 325 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 ZNF420Q8TAQ5 688 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-203ENST00000471344 COQ7Q99807 217 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 HDHD2Q9H0R4 259 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 PNRC2Q9NPJ4 139 aaKnown RBP12.94□□□□□ -0.34
COL1A1-203ENST00000471344 MRPL22Q9NWU5 206 aaKnown RBP12.94□□□□□ -0.34
COL1A1-203ENST00000471344 OPN4Q9UHM6 478 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 ATPIF1Q9UII2 106 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 TMCC3Q9ULS5 477 aa12.94□□□□□ -0.34
COL1A1-203ENST00000471344 A0A0G2JMP0 313 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 A0A0X1KG70 313 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 TCRBV5S2A0A599 114 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 MLNRO43193 412 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 ZNF205O95201 554 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 ANPEPP15144 967 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 RAC2P15153 192 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 EPHA1P21709 976 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms