RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 SF3B4Q15427 424 aaKnown RBP eCLIP8.24□□□□□ -1.092e-26■■■■■ 102.6
VPS52-216ENST00000471309 GUSBP1Q15486 140 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 PLEKHN1Q494U1 663 aaPredicted RBP8.24□□□□□ -1.09
VPS52-216ENST00000471309 ACSF3Q4G176 576 aaPredicted RBP8.24□□□□□ -1.09
VPS52-216ENST00000471309 CCDC92Q53HC0 331 aaPredicted RBP8.24□□□□□ -1.09
VPS52-216ENST00000471309 DDI2Q5TDH0 399 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 TMEM244Q5VVB8 128 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 MZT2AQ6P582 158 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.24□□□□□ -1.09
VPS52-216ENST00000471309 NUFIP2Q7Z417 695 aaKnown RBP8.24□□□□□ -1.09
VPS52-216ENST00000471309 ABHD12BQ7Z5M8 362 aaPredicted RBP8.24□□□□□ -1.09
VPS52-216ENST00000471309 FGD2Q7Z6J4 655 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 CCDC190Q86UF4 302 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 ZNF100Q8IYN0 542 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 LRRC18Q8N456 261 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 OR10AC1Q8NH08 325 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 WNT2BQ93097 391 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 TMEM106AQ96A25 262 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 FBXO17Q96EF6 278 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 CEP19Q96LK0 163 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 GPR137Q96N19 417 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 TRIB1Q96RU8 372 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 SLITRK2Q9H156 845 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 ZCCHC4Q9H5U6 513 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 MALT1Q9UDY8 824 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 HHLA2Q9UM44 414 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 DHDHQ9UQ10 334 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 RAXQ9Y2V3 346 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 BOLA1Q9Y3E2 137 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 CMAHPQ9Y471 501 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 KMT2BQ9UMN6 2715 aaPredicted RBP8.24□□□□□ -1.09
VPS52-216ENST00000471309 A0A1W2PPK0 400 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 OR6C6A6NF89 314 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 TTLL8A6PVC2 850 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 NOTOA8MTQ0 251 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 AHRRA9YTQ3 701 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 CTDSP2O14595 271 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 GPR37O15354 613 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 RGS5O15539 181 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 SGCEO43556 437 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 SYNGR3O43761 229 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 DOK2O60496 412 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 WISP2O76076 250 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 IGHV3-9P01782 118 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 CD2P06729 351 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 ACSM4P0C7M7 580 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 CRYGSP22914 178 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 CD40LGP29965 261 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 THBS2P35442 1172 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 OR3A2P47893 321 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 CX3CR1P49238 355 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 OR10A3P58181 314 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 ZNF121P58317 390 aaPredicted RBP8.23□□□□□ -1.09
VPS52-216ENST00000471309 PPP3R1P63098 170 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 ARF1P84077 181 aaKnown RBP8.23□□□□□ -1.09
VPS52-216ENST00000471309 ODF4Q2M2E3 257 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 CEP78Q5JTW2 689 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 SPANXN2Q5MJ10 180 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 OR2A2Q6IF42 318 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 FAM180AQ6UWF9 173 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 ZNF813Q6ZN06 617 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 SLC16A14Q7RTX9 510 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 PRSS45Q7RTY3 260 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 LAX1Q8IWV1 398 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 RDH10Q8IZV5 341 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 OR51A4Q8NGJ6 313 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 ASB5Q8WWX0 329 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 EXTL1Q92935 676 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 SH3GL3Q99963 347 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 SLC30A2Q9BRI3 323 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 PBOV1Q9GZY1 135 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 SLC25A18Q9H1K4 315 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 MIXL1Q9H2W2 232 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 OCEL1Q9H607 264 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 TCF7L1Q9HCS4 588 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 PLEK2Q9NYT0 353 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 UPB1Q9UBR1 384 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 ATPIF1Q9UII2 106 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 SLC5A6Q9Y289 635 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 TIMM10BQ9Y5J6 103 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 FREM2Q5SZK8 3169 aa8.23□□□□□ -1.09
VPS52-216ENST00000471309 J3QRK9 145 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 P2RY10O00398 339 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 MMP7P09237 267 aaPredicted RBP8.22□□□□□ -1.09
VPS52-216ENST00000471309 EPXP11678 715 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 ZNF32P17041 273 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 CCL1P22362 96 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 APEX1P27695 318 aaKnown RBP8.22□□□□□ -1.09
VPS52-216ENST00000471309 CFPP27918 469 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 TNFSF8P32971 234 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 PTGER4P35408 488 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 MAGEB1P43366 347 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 PRKXP51817 358 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 PPP5CP53041 499 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 CXADRP78310 365 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 FAPQ12884 760 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 SLC25A35Q3KQZ1 300 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 KRTAP27-1Q3LI81 207 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 SLC36A2Q495M3 483 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 KRTCAP3Q53RY4 240 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms