RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 IMPA1P29218 277 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 RPL4P36578 427 aaKnown RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 ERVFRD-1P60508 538 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 TBPL1P62380 186 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 RAC1P63000 192 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 B4GALNT1Q00973 533 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 PAX5Q02548 391 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 TLE4Q04727 773 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 HNF4GQ14541 408 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 DECR1Q16698 335 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 RPUSD3Q6P087 351 aaKnown RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 ANKRD16Q6P6B7 361 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 BTNL3Q6UXE8 466 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SLCO4C1Q6ZQN7 724 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 TPGS1Q6ZTW0 290 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 C8orf86Q6ZUL3 223 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 FAM220AQ7Z4H9 259 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 LILRA3Q8N6C8 439 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 TSEN15Q8WW01 171 aaKnown RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 SUSD6Q92537 303 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 TMEM106AQ96A25 262 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 CASD1Q96PB1 797 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ZNF385AQ96PM9 386 aaKnown RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 DIRC2Q96SL1 478 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 PTPN18Q99952 460 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 C16orf70Q9BSU1 422 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 RNF126Q9BV68 326 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 DNAJC4Q9NNZ3 241 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 C20orf141Q9NUB4 165 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SEMA5BQ9P283 1151 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SUSD2Q9UGT4 822 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 FLVCR1Q9Y5Y0 555 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 KCNE3Q9Y6H6 103 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 DOCK3Q8IZD9 2030 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 CCDC187A0A096LP49 1063 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 A0A1B0GTH9 108 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 TMEM202A6NGA9 273 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 CDRT15L2A8MXV6 281 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 LEFTY2O00292 366 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 AQP7O14520 342 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 AHSA1O95433 338 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 IL33O95760 270 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 SCGB1D2O95969 90 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 IGSF6O95976 241 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 STATHP02808 62 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 OR2T7P0C7T2 308 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 MPC1LP0DKB6 136 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 PI3P19957 117 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 KLK2P20151 261 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 MAKP20794 623 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 ZBTB25P24278 435 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 CD82P27701 267 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 SNCAP37840 140 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 CEACAM6P40199 344 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 ALDH3B1P43353 468 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 PPICP45877 212 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 MAPK8P45983 427 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 OR1G1P47890 313 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 TFPI2P48307 235 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 RAB32Q13637 225 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 ELOBQ15370 118 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 PNLIPRP3Q17RR3 467 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 C2orf76Q3KRA6 126 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 Q499Y3 187 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 DCAF10Q5QP82 559 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 CD300LGQ6UXG3 332 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 GKN2Q86XP6 184 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 PNLDC1Q8NA58 520 aaKnown RBP3.81□□□□□ -1.8
VPS50-210ENST00000471188 ADAD2Q8NCV1 583 aaKnown RBP3.81□□□□□ -1.8
VPS50-210ENST00000471188 OR13C8Q8NGS7 320 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 OR2T27Q8NH04 317 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 OR5AK2Q8NH90 309 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 FIBINQ8TAL6 211 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 RNASE8Q8TDE3 154 aaKnown RBP3.81□□□□□ -1.8
VPS50-210ENST00000471188 RAB39BQ96DA2 213 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 MUCL1Q96DR8 90 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 FAM210BQ96KR6 192 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 SUSD3Q96L08 255 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 MRGPRX3Q96LB0 322 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 CDC6Q99741 560 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 PRRT1Q99946 306 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 VPS25Q9BRG1 176 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 URM1Q9BTM9 101 aaKnown RBP3.81□□□□□ -1.8
VPS50-210ENST00000471188 EFCAB11Q9BUY7 163 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 ULBP3Q9BZM4 244 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 OR11A1Q9GZK7 315 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 TWSG1Q9GZX9 223 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 ADAM19Q9H013 955 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 PARD6AQ9NPB6 346 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 SIRT3Q9NTG7 399 aaPredicted RBP3.81□□□□□ -1.8
VPS50-210ENST00000471188 MARCH5Q9NX47 278 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 LUZP4Q9P127 313 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 HSF4Q9ULV5 492 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 TMED3Q9Y3Q3 217 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 PHIPQ8WWQ0 1821 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 PTPRDP23468 1912 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 GREB1Q4ZG55 1949 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 TRAV8-7A0A075B6U6 113 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.81□□□□□ -1.8
VPS50-210ENST00000471188 C20orf202A1L168 122 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms