RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 COL6A5A8TX70 2615 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 PPIHO43447 177 aaKnown RBP11.94□□□□□ -0.5
COMMD3-208ENST00000470045 SPRY3O43610 288 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 CDC14BO60729 498 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 IFNA2P01563 188 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 DBHP09172 617 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 RAP2AP10114 183 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 RGS6P49758 472 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 LMO4P61968 165 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.94□□□□□ -0.5
COMMD3-208ENST00000470045 TRAP1Q12931 704 aaKnown RBP11.94□□□□□ -0.5
COMMD3-208ENST00000470045 PPP1R8Q12972 351 aaKnown RBP11.94□□□□□ -0.5
COMMD3-208ENST00000470045 CDK5R2Q13319 367 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 CCNIQ14094 377 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 GK3PQ14409 553 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 TSTQ16762 297 aaKnown RBP11.94□□□□□ -0.5
COMMD3-208ENST00000470045 MICAQ29983 383 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 CLEC12AQ5QGZ9 265 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 SLC18B1Q6NT16 456 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 TRPM8Q7Z2W7 1104 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 ADGRG5Q8IZF4 528 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 LNX2Q8N448 690 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 AQP11Q8NBQ7 271 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 OR52E2Q8NGJ4 325 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 HAVCR1Q96D42 359 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 ELMOD3Q96FG2 381 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 DGCR6LQ9BY27 220 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 REEP1Q9H902 201 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 DECR2Q9NUI1 292 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 MRPL22Q9NWU5 206 aaKnown RBP11.94□□□□□ -0.5
COMMD3-208ENST00000470045 PURGQ9UJV8 347 aaKnown RBP11.94□□□□□ -0.5
COMMD3-208ENST00000470045 GRIP1Q9Y3R0 1128 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 SAMHD1Q9Y3Z3 626 aaKnown RBP11.94□□□□□ -0.5
COMMD3-208ENST00000470045 CACNG2Q9Y698 323 aa11.94□□□□□ -0.5
COMMD3-208ENST00000470045 AQP12BA6NM10 295 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 B4DSR2 109 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 FAM157AC9JC47 383 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 TIMM8AO60220 97 aaPredicted RBP11.93□□□□□ -0.5
COMMD3-208ENST00000470045 UBOX5O94941 541 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 RAC2P15153 192 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 THBS2P35442 1172 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 GGT2P36268 569 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 CENPAP49450 140 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 DVL1P1P54792 670 aaPredicted RBP11.93□□□□□ -0.5
COMMD3-208ENST00000470045 RSPO1Q2MKA7 263 aaPredicted RBP11.93□□□□□ -0.5
COMMD3-208ENST00000470045 CR1LQ2VPA4 569 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 SLC36A3Q495N2 470 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 SLC35F1Q5T1Q4 408 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 CORO6Q6QEF8 472 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 CD300LDQ6UXZ3 194 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 FBXW12Q6X9E4 464 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 CFAP77Q6ZQR2 320 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 Q6ZR03 302 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 COLCA1Q6ZS62 124 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 AQP12AQ8IXF9 295 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 BCAS4Q8TDM0 211 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 THTPAQ9BU02 230 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 MSL2Q9HCI7 577 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 PNRC2Q9NPJ4 139 aaKnown RBP11.93□□□□□ -0.5
COMMD3-208ENST00000470045 CYB5R1Q9UHQ9 305 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 KCNG2Q9UJ96 466 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 U3KQV3 271 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 DYSFO75923 2080 aa11.93□□□□□ -0.5
COMMD3-208ENST00000470045 ARRDC5A6NEK1 342 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 CLDN25C9JDP6 229 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 TPD52L2O43399 206 aaKnown RBP11.92□□□□□ -0.5
COMMD3-208ENST00000470045 HNF1AP20823 631 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 ERFP50548 548 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 HFEQ30201 348 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 DNAL1Q4LDG9 190 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 SPRNQ5BIV9 151 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 IL17RELQ6ZVW7 336 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.92□□□□□ -0.5
COMMD3-208ENST00000470045 LINC00346Q8IVM7 164 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 CYB561A3Q8NBI2 242 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 SLC37A3Q8NCC5 494 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 OR4Q3Q8NH05 313 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 PTP4A1Q93096 173 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 APOBEC3DQ96AK3 386 aaPredicted RBP11.92□□□□□ -0.5
COMMD3-208ENST00000470045 SLC7A6OSQ96CW6 309 aaPredicted RBP11.92□□□□□ -0.5
COMMD3-208ENST00000470045 CMBLQ96DG6 245 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 LRGUKQ96M69 825 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 RBM4Q9BWF3 364 aaKnown RBP11.92□□□□□ -0.5
COMMD3-208ENST00000470045 NMNAT2Q9BZQ4 307 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 EGLN1Q9GZT9 426 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 NARFLQ9H6Q4 476 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 TBC1D23Q9NUY8 699 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 TREM2Q9NZC2 230 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 BAIAP2Q9UQB8 552 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 WIPI2Q9Y4P8 454 aa11.92□□□□□ -0.5
COMMD3-208ENST00000470045 DEAF1O75398 565 aaPredicted RBP11.91□□□□□ -0.5
COMMD3-208ENST00000470045 SOX14O95416 240 aa11.91□□□□□ -0.5
COMMD3-208ENST00000470045 MSMBP08118 114 aa11.91□□□□□ -0.5
COMMD3-208ENST00000470045 ACSM4P0C7M7 580 aa11.91□□□□□ -0.5
COMMD3-208ENST00000470045 HOXB6P17509 224 aaKnown RBP11.91□□□□□ -0.5
COMMD3-208ENST00000470045 SRD5A1P18405 259 aa11.91□□□□□ -0.5
COMMD3-208ENST00000470045 ECH1Q13011 328 aa11.91□□□□□ -0.5
COMMD3-208ENST00000470045 AVPI1Q5T686 147 aa11.91□□□□□ -0.5
COMMD3-208ENST00000470045 CXXC5Q7LFL8 322 aaKnown RBP11.91□□□□□ -0.5
COMMD3-208ENST00000470045 OR10G2Q8NGC3 310 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms