RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 ATP1B3P54709 279 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 FABP9Q0Z7S8 132 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 GGTLC2Q14390 218 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 GXYLT1Q4G148 440 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 WDR74Q6RFH5 385 aaPredicted RBP12.48□□□□□ -0.41
GPC1-208ENST00000469694 FIP1L1Q6UN15 594 aaKnown RBP12.48□□□□□ -0.41
GPC1-208ENST00000469694 LANCL3Q6ZV70 420 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 TMED4Q7Z7H5 227 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 LRRTM1Q86UE6 522 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 C1orf210Q8IVY1 113 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 SLITRK2Q9H156 845 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 TSPAN10Q9H1Z9 355 aaPredicted RBP12.48□□□□□ -0.41
GPC1-208ENST00000469694 SERTAD3Q9UJW9 196 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 ZNF729A6NN14 1252 aaPredicted RBP12.47□□□□□ -0.41
GPC1-208ENST00000469694 IFNGP01579 166 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 FBLP22087 321 aaKnown RBP12.47□□□□□ -0.41
GPC1-208ENST00000469694 GFOD2Q3B7J2 385 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 ANKRD16Q6P6B7 361 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 MED25Q71SY5 747 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 C15orf54Q8N8G6 183 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 OR52E2Q8NGJ4 325 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 STOML3Q8TAV4 291 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 RNF141Q8WVD5 230 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 SGK3Q96BR1 496 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 OR6C1Q96RD1 312 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 NRIP2Q9BQI9 281 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 NXF5Q9H1B4 397 aaKnown RBP12.47□□□□□ -0.41
GPC1-208ENST00000469694 MYOZ1Q9NP98 299 aaPredicted RBP12.47□□□□□ -0.41
GPC1-208ENST00000469694 SMCO4Q9NRQ5 59 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 DNAJB12Q9NXW2 375 aaKnown RBP12.47□□□□□ -0.41
GPC1-208ENST00000469694 A0A1W2PPE3 182 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 ZNF705EA8MWA4 302 aaPredicted RBP12.47□□□□□ -0.41
GPC1-208ENST00000469694 CSRP1P21291 193 aaKnown RBP12.47□□□□□ -0.41
GPC1-208ENST00000469694 CENPAP49450 140 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 SLC37A1P57057 533 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 PJVKQ0ZLH3 352 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 WDR5BQ86VZ2 330 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 TMPRSS12Q86WS5 348 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 ZNF561Q8N587 486 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 FBXO17Q96EF6 278 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 PIK3IP1Q96FE7 263 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 TNFRSF13CQ96RJ3 184 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 KLHDC3Q9BQ90 382 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 TMEM27Q9HBJ8 222 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 MEPEQ9NQ76 525 aaPredicted RBP12.47□□□□□ -0.41
GPC1-208ENST00000469694 STEAP1Q9UHE8 339 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 FBXO4Q9UKT5 387 aa12.47□□□□□ -0.41
GPC1-208ENST00000469694 A0A087WV48 116 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 CCDC163A0A0D9SF12 145 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 F8VVB4 439 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 F8VWA3 439 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 SMAD9O15198 467 aaKnown RBP12.46□□□□□ -0.41
GPC1-208ENST00000469694 AK1P00568 194 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 CD74P04233 296 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 AGAP20933 346 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 CD34P28906 385 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 SDHAP31040 664 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 ACAA2P42765 397 aaKnown RBP12.46□□□□□ -0.41
GPC1-208ENST00000469694 DHRS2Q13268 280 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 FAM69BQ5VUD6 431 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 ARHGAP11AQ6P4F7 1023 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 IL34Q6ZMJ4 242 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 NDUFAF7Q7L592 441 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 INO80EQ8NBZ0 244 aaPredicted RBP12.46□□□□□ -0.41
GPC1-208ENST00000469694 OR1J2Q8NGS2 313 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 ADAMTS18Q8TE60 1221 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 RNF166Q96A37 237 aaPredicted RBP12.46□□□□□ -0.41
GPC1-208ENST00000469694 TMEM41AQ96HV5 264 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 SLC25A21Q9BQT8 299 aaPredicted RBP12.46□□□□□ -0.41
GPC1-208ENST00000469694 VN1R1Q9GZP7 353 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 RPH3AQ9Y2J0 694 aaPredicted RBP12.46□□□□□ -0.41
GPC1-208ENST00000469694 MED31Q9Y3C7 131 aa12.46□□□□□ -0.41
GPC1-208ENST00000469694 A0A1B0GWA3 101 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 A0A1B0GX78 115 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 CCSO14618 274 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 TXNL1O43396 289 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 CTAG2O75638 210 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 FARS2O95363 451 aaKnown RBP12.46□□□□□ -0.42
GPC1-208ENST00000469694 NGFRP08138 427 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 HOXA6P31267 233 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 PRSS3P35030 304 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 CAPZA1P52907 286 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 SCAND1P57086 179 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 RBM39Q14498 530 aaKnown RBP12.46□□□□□ -0.42
GPC1-208ENST00000469694 NR0B2Q15466 257 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 Q3ZCU0 254 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 TMEM200AQ86VY9 491 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 SLC30A7Q8NEW0 376 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 OR4K13Q8NH42 304 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 C14orf79Q96F83 325 aa12.46□□□□□ -0.42
GPC1-208ENST00000469694 TRAV18A0A075B6X5 111 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 IGKV3D-11A0A0A0MRZ8 115 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 PSMD9O00233 223 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 ST8SIA5O15466 376 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 EFNB2P52799 333 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 MST1LQ2TV78 715 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 Q499Y3 187 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 GABRG1Q8N1C3 465 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 TMEM105Q8N8V8 129 aa12.45□□□□□ -0.42
GPC1-208ENST00000469694 ZNRF4Q8WWF5 429 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms