RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 PRRG4Q9BZD6 226 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 LINC00470Q9BZP3 86 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 HDHD2Q9H0R4 259 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 LDAHQ9H6V9 325 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 CYSLTR2Q9NS75 346 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 DDX28Q9NUL7 540 aaKnown RBP8.26□□□□□ -1.09
SMC1A-205ENST00000469129 FAM206AQ9NX38 181 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 KLK13Q9UKR3 277 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 FBXL3Q9UKT7 428 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 SLC22A13Q9Y226 551 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 ALPK2Q86TB3 2170 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 NCOA6Q14686 2063 aaPredicted RBP8.26□□□□□ -1.09
SMC1A-205ENST00000469129 TRGV5A0A0B4J1U4 118 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 A0A1B0GTH9 108 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 MEGF11A6BM72 1044 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 ZNF724A8MTY0 619 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 H0YC42 278 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 TFECO14948 347 aaPredicted RBP8.25□□□□□ -1.09
SMC1A-205ENST00000469129 PFDN1O60925 122 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 KRT33AO76009 404 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 UBL3O95164 117 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 FARS2O95363 451 aaKnown RBP8.25□□□□□ -1.09
SMC1A-205ENST00000469129 HLA-DQB1P01920 261 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 EIF4EP06730 217 aaKnown RBP8.25□□□□□ -1.09
SMC1A-205ENST00000469129 CELA3AP09093 270 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 CST2P09228 141 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 PITPNBP48739 271 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 CX3CR1P49238 355 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 CCL11P51671 97 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 PCBD1P61457 104 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 HIST1H3AP68431 136 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 ECH1Q13011 328 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 ASAH1Q13510 395 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 RAB35Q15286 201 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 HES5Q5TA89 166 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 HIST2H3PS2Q5TEC6 136 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 FAM27BQ5VT28 67 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 GLT8D1Q68CQ7 371 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 HIST2H3AQ71DI3 136 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.25□□□□□ -1.09
SMC1A-205ENST00000469129 LUZP2Q86TE4 346 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 LRRTM1Q86UE6 522 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 SNX29P2Q8IUI4 249 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 Q8N402 240 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 ZNF283Q8N7M2 679 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 C19orf18Q8NEA5 215 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 OR10S1Q8NGN2 331 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 RAB40AQ8WXH6 277 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 SPTSSAQ969W0 71 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 NABP1Q96AH0 204 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 CNTNAP3BQ96NU0 1288 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 KCNJ15Q99712 375 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 SOSTQ9BQB4 213 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 CNTNAP3Q9BZ76 1288 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 PBOV1Q9GZY1 135 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 SLCO5A1Q9H2Y9 848 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 PPP1R3EQ9H7J1 279 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 ZDHHC11Q9H8X9 412 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 GP6Q9HCN6 339 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 TMEM38BQ9NVV0 291 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 C14orf119Q9NWQ9 140 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 STEAP1Q9UHE8 339 aa8.25□□□□□ -1.09
SMC1A-205ENST00000469129 NOSIPQ9Y314 301 aaKnown RBP8.25□□□□□ -1.09
SMC1A-205ENST00000469129 A0A1W2PQ09 198 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 SYT7O43581 403 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 MRPL33O75394 65 aaKnown RBP8.24□□□□□ -1.09
SMC1A-205ENST00000469129 CEACAM4O75871 244 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 TPPPO94811 219 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 TTRP02766 147 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 MAS1P04201 325 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 ERCC1P07992 297 aaPredicted RBP8.24□□□□□ -1.09
SMC1A-205ENST00000469129 CSF3P09919 207 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 ACSM4P0C7M7 580 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 SNRPBP14678 240 aaKnown RBP8.24□□□□□ -1.09
SMC1A-205ENST00000469129 ZNF20P17024 532 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 ZNF24P17028 368 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 CTSSP25774 331 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 MRPS10P82664 201 aaKnown RBP8.24□□□□□ -1.09
SMC1A-205ENST00000469129 SRYQ05066 204 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 ENDOGQ14249 297 aaKnown RBP8.24□□□□□ -1.09
SMC1A-205ENST00000469129 RAB11BQ15907 218 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 DEFB109BQ30KR1 87 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 ELFN2Q5R3F8 820 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 PHYHD1Q5SRE7 291 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 MZT2BQ6NZ67 158 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 ABHD12BQ7Z5M8 362 aaPredicted RBP8.24□□□□□ -1.09
SMC1A-205ENST00000469129 SYT9Q86SS6 491 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 FDCSPQ8NFU4 85 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 OR4M1Q8NGD0 313 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 OR51A4Q8NGJ6 313 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 OR10AC1Q8NH08 325 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 ABHD3Q8WU67 409 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 ASB5Q8WWX0 329 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 FOXRED1Q96CU9 486 aaPredicted RBP8.24□□□□□ -1.09
SMC1A-205ENST00000469129 ZNF845Q96IR2 970 aaPredicted RBP8.24□□□□□ -1.09
SMC1A-205ENST00000469129 ALKBH3Q96Q83 286 aaPredicted RBP8.24□□□□□ -1.09
SMC1A-205ENST00000469129 SLC22A4Q9H015 551 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 LIN7BQ9HAP6 207 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 BCO1Q9HAY6 547 aa8.24□□□□□ -1.09
SMC1A-205ENST00000469129 PNRC2Q9NPJ4 139 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms