RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 RAB39AQ14964 217 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 TAB1Q15750 504 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF774Q6NX45 483 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 LRRN1Q6UXK5 716 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 PRSS48Q7RTY5 328 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 LHFPL3Q86UP9 236 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 COMMD2Q86X83 199 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF283Q8N7M2 679 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 SLC30A7Q8NEW0 376 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 OR1F12Q8NHA8 337 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 HAVCR2Q8TDQ0 301 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 SMAP2Q8WU79 429 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-216ENST00000468949 RNF133Q8WVZ7 376 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 BOD1Q96IK1 185 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 C4orf36Q96KX1 117 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 COQ7Q99807 217 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 RHNO1Q9BSD3 238 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 C1QTNF6Q9BXI9 259 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 WNT5BQ9H1J7 359 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 ESRP2Q9H6T0 727 aaKnown RBP7.08□□□□□ -1.28
HDAC6-216ENST00000468949 NIPAL2Q9H841 368 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 SP140LQ9H930 580 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 FGF20Q9NP95 211 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-216ENST00000468949 TRIM36Q9NQ86 728 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 MRPS18AQ9NVS2 196 aaKnown RBP7.08□□□□□ -1.28
HDAC6-216ENST00000468949 ERVK13-1Q9NX77 482 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 ERVK-18Q9QC07 812 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 ATPIF1Q9UII2 106 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 POU2F3Q9UKI9 436 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 COPS3Q9UNS2 423 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 SPEF1Q9Y4P9 236 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 SLC25A15Q9Y619 301 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 DIDO1Q9BTC0 2240 aaKnown RBP7.08□□□□□ -1.28
HDAC6-216ENST00000468949 MAST4O15021 2626 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 UTP20O75691 2785 aaKnown RBP7.07□□□□□ -1.28
HDAC6-216ENST00000468949 A0A087WXM4 84 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 C5orf49A4QMS7 147 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 MAGEA13PA6NCF6 341 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 METTL15A6NJ78 407 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 M0R135 149 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 PSMD9O00233 223 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 TBX1O43435 398 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 LILRA1O75019 489 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 SULT1C4O75897 302 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 RPP14O95059 124 aaKnown RBP7.07□□□□□ -1.28
HDAC6-216ENST00000468949 ABHD16AO95870 558 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 CRYAAP02489 173 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 MT-ND2P03891 347 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 SERPINA5P05154 406 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 RPSAP08865 295 aaKnown RBP7.07□□□□□ -1.28
HDAC6-216ENST00000468949 HTR1AP08908 422 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 MMP7P09237 267 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-216ENST00000468949 HSMCR30P0CW71 290 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 COX5BP10606 129 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 APEX1P27695 318 aaKnown RBP7.07□□□□□ -1.28
HDAC6-216ENST00000468949 GRNP28799 593 aaKnown RBP7.07□□□□□ -1.28
HDAC6-216ENST00000468949 CX3CR1P49238 355 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 RGS6P49758 472 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 PRKXP51817 358 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 NR1H2P55055 460 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 TAS2R43P59537 309 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 MVKQ03426 396 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 MED22Q15528 200 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 PCK2Q16822 640 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 TP53I3Q53FA7 332 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF787Q6DD87 383 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 LAIR2Q6ISS4 152 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF773Q6PK81 442 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 DEGS2Q6QHC5 323 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 KCTD20Q7Z5Y7 419 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF679Q8IYX0 411 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 SYS1Q8N2H4 156 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 WDR31Q8NA23 367 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 IL17RDQ8NFM7 739 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 TSPAN14Q8NG11 270 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 OR52N1Q8NH53 320 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 ST7LQ8TDW4 575 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 FCGR1BQ92637 280 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF799Q96GE5 643 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 MAP6Q96JE9 813 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 RADILQ96JH8 1075 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 DACH2Q96NX9 599 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 OR8B4Q96RC9 309 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 JAM3Q9BX67 310 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF696Q9H7X3 374 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 MOB1AQ9H8S9 216 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 ELOVL3Q9HB03 270 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 BRD7Q9NPI1 651 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 DDX28Q9NUL7 540 aaKnown RBP7.07□□□□□ -1.28
HDAC6-216ENST00000468949 FKBP14Q9NWM8 211 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 PGPEP1Q9NXJ5 209 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF224Q9NZL3 707 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 KLHDC2Q9Y2U9 406 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 CAB39Q9Y376 341 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-216ENST00000468949 GRIP1Q9Y3R0 1128 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 LRP12Q9Y561 859 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 PCDHGB5Q9Y5G0 923 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 N6AMT1Q9Y5N5 214 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 NAV2Q8IVL1 2488 aa7.07□□□□□ -1.28
HDAC6-216ENST00000468949 INTS1Q8N201 2190 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms