RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 TTRP02766 147 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 ALDOBP05062 364 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 ERCC1P07992 297 aaPredicted RBP6.74□□□□□ -1.33
COL6A3-208ENST00000468792 ITGA5P08648 1049 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 ACSM4P0C7M7 580 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 GABRA1P14867 456 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 RAB6AP20340 208 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 MSR1P21757 451 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 ENPP1P22413 925 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 OTX1P32242 354 aaPredicted RBP6.74□□□□□ -1.33
COL6A3-208ENST00000468792 BTCP35070 178 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 CD96P40200 585 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 MAGEB1P43366 347 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 GSK3AP49840 483 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 CLDN17P56750 224 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 CARD18P57730 90 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 ECH1Q13011 328 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 MFAP5Q13361 173 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 SNTB2Q13425 540 aaKnown RBP6.74□□□□□ -1.33
COL6A3-208ENST00000468792 TRIP6Q15654 476 aaKnown RBP6.74□□□□□ -1.33
COL6A3-208ENST00000468792 FAM189A2Q15884 450 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 TATDN3Q17R31 274 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 TMEM69Q5SWH9 247 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 HES3Q5TGS1 186 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 ABHD17BQ5VST6 288 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 FAM27BQ5VT28 67 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 OLFML2AQ68BL7 652 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 ABLIM2Q6H8Q1 611 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF813Q6ZN06 617 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 TMPRSS12Q86WS5 348 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 DTX1Q86Y01 620 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 TCTE3Q8IZS6 198 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 PLPP7Q8NBV4 271 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 OR5D14Q8NGL3 314 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 OR2V1Q8NHB1 315 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 FCAMRQ8WWV6 532 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 SLC7A6Q92536 515 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 CPNE4Q96A23 557 aaPredicted RBP6.74□□□□□ -1.33
COL6A3-208ENST00000468792 TMEM45BQ96B21 275 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 FAM3DQ96BQ1 224 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 THOC3Q96J01 351 aaKnown RBP6.74□□□□□ -1.33
COL6A3-208ENST00000468792 ST6GAL2Q96JF0 529 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 UTP23Q9BRU9 249 aaKnown RBP6.74□□□□□ -1.33
COL6A3-208ENST00000468792 PBOV1Q9GZY1 135 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 MMP28Q9H239 520 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 SLCO5A1Q9H2Y9 848 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 RNF122Q9H9V4 155 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 SCPEP1Q9HB40 452 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 DIABLOQ9NR28 239 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 PAQR5Q9NXK6 330 aaPredicted RBP6.74□□□□□ -1.33
COL6A3-208ENST00000468792 LRFN1Q9P244 771 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 NLKQ9UBE8 527 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 B4GALT7Q9UBV7 327 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF221Q9UK13 617 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 ITGB1BP2Q9UKP3 347 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 FBXL3Q9UKT7 428 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 AHCTF1Q8WYP5 2266 aa6.74□□□□□ -1.33
COL6A3-208ENST00000468792 EML6Q6ZMW3 1958 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 A0A0B4J203 849 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 A0A0B4J293 547 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 A0A1B0GTI1 187 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 LOC101059948A0A1B0GTJ6 334 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 A0A1W2PPL8 197 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 CIB4A0PJX0 185 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 ANKRD20A5PA0PJZ0 165 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 GGT3PA6NGU5 568 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 OR6C65A6NJZ3 312 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 DHRS7CA6NNS2 312 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF716A6NP11 495 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 H7C417 338 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 SMAD9O15198 467 aaKnown RBP6.73□□□□□ -1.33
COL6A3-208ENST00000468792 SYT7O43581 403 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 CYTIPO60759 359 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 CTAG2O75638 210 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 TNFSF15O95150 251 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 WNT11O96014 354 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 MAS1P04201 325 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 TCRBP04435 133 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 CST2P09228 141 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 CDK2P24941 298 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 HTR2CP28335 458 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 GDNFP39905 211 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 DNASE1L1P49184 302 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF84P51523 738 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 MECP2P51608 486 aaKnown RBP6.73□□□□□ -1.33
COL6A3-208ENST00000468792 TAS2R20P59543 309 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 DGCR2P98153 550 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 C2orf76Q3KRA6 126 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 CCDC92Q53HC0 331 aaPredicted RBP6.73□□□□□ -1.33
COL6A3-208ENST00000468792 RSBN1Q5VWQ0 802 aaPredicted RBP6.73□□□□□ -1.33
COL6A3-208ENST00000468792 B3GNTL1Q67FW5 361 aaPredicted RBP6.73□□□□□ -1.33
COL6A3-208ENST00000468792 RAB12Q6IQ22 244 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 CFAP77Q6ZQR2 320 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 PGAP1Q75T13 922 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 BTN2A1Q7KYR7 527 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 DOK3Q7L591 496 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 PRSS45Q7RTY3 260 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 LINC00346Q8IVM7 164 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 SIAH3Q8IW03 269 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 OR13C3Q8NGS6 347 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms