RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SLC36A3Q495N2 470 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 CORO6Q6QEF8 472 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 RASSF6Q6ZTQ3 369 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 TRPM8Q7Z2W7 1104 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 OR52L1Q8NGH7 329 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 CCDC124Q96CT7 223 aaKnown RBP14.53□□□□□ -0.08
SSBP1-207ENST00000468267 CMBLQ96DG6 245 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 LRGUKQ96M69 825 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 COG8Q96MW5 612 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 DIRC2Q96SL1 478 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 DDOQ99489 341 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 COQ7Q99807 217 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 THTPAQ9BU02 230 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 FN3KQ9H479 309 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 NARFLQ9H6Q4 476 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 REEP1Q9H902 201 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 SAMHD1Q9Y3Z3 626 aaKnown RBP14.53□□□□□ -0.08
SSBP1-207ENST00000468267 DYSFO75923 2080 aa14.53□□□□□ -0.08
SSBP1-207ENST00000468267 B4DSR2 109 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 J3QW42 95 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 RAP2AP10114 183 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 KITLGP21583 273 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 RGS6P49758 472 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 LMO4P61968 165 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 TRAP1Q12931 704 aaKnown RBP14.52□□□□□ -0.09
SSBP1-207ENST00000468267 CDK5R2Q13319 367 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 ZMAT1Q5H9K5 638 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 ZNF362Q5T0B9 420 aaPredicted RBP14.52□□□□□ -0.09
SSBP1-207ENST00000468267 AQP11Q8NBQ7 271 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 OR8D4Q8NGM9 314 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 PTP4A1Q93096 173 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 HAVCR1Q96D42 359 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 ELMOD3Q96FG2 381 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 DGCR6LQ9BY27 220 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 PLA2G12AQ9BZM1 189 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 EGLN1Q9GZT9 426 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 HDHD2Q9H0R4 259 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 MSL2Q9HCI7 577 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 TREM2Q9NZC2 230 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 PURGQ9UJV8 347 aaKnown RBP14.52□□□□□ -0.09
SSBP1-207ENST00000468267 CACNG2Q9Y698 323 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 U3KQV3 271 aa14.52□□□□□ -0.09
SSBP1-207ENST00000468267 CD55P08174 381 aa14.51□□□□□ -0.09
SSBP1-207ENST00000468267 HNF1AP20823 631 aa14.51□□□□□ -0.09
SSBP1-207ENST00000468267 GGT2P36268 569 aa14.51□□□□□ -0.09
SSBP1-207ENST00000468267 RSPO1Q2MKA7 263 aaPredicted RBP14.51□□□□□ -0.09
SSBP1-207ENST00000468267 CR1LQ2VPA4 569 aa14.51□□□□□ -0.09
SSBP1-207ENST00000468267 HFEQ30201 348 aa14.51□□□□□ -0.09
SSBP1-207ENST00000468267 SLC18B1Q6NT16 456 aa14.51□□□□□ -0.09
SSBP1-207ENST00000468267 IL17RELQ6ZVW7 336 aa14.51□□□□□ -0.09
SSBP1-207ENST00000468267 LNX2Q8N448 690 aa14.51□□□□□ -0.09
SSBP1-207ENST00000468267 BCAS4Q8TDM0 211 aa14.51□□□□□ -0.09
SSBP1-207ENST00000468267 CDADC1Q9BWV3 514 aa14.51□□□□□ -0.09
SSBP1-207ENST00000468267 CYB5R1Q9UHQ9 305 aa14.51□□□□□ -0.09
SSBP1-207ENST00000468267 CLDN25C9JDP6 229 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 UBOX5O94941 541 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 HLA-DQA2P01906 255 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 RAC2P15153 192 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 SRD5A1P18405 259 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 DVL1P1P54792 670 aaPredicted RBP14.5□□□□□ -0.09
SSBP1-207ENST00000468267 MVKQ03426 396 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 KRTAP27-1Q3LI81 207 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 SPRNQ5BIV9 151 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 AVPI1Q5T686 147 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 CFAP77Q6ZQR2 320 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 LINC00346Q8IVM7 164 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 ADGRG5Q8IZF4 528 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 CYB561A3Q8NBI2 242 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 OR5L1Q8NGL2 311 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 OR2AJ1Q8NGZ0 328 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 CCL17Q92583 94 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 APOBEC3DQ96AK3 386 aaPredicted RBP14.5□□□□□ -0.09
SSBP1-207ENST00000468267 CHID1Q9BWS9 393 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 TSSK6Q9BXA6 273 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 TBC1D23Q9NUY8 699 aa14.5□□□□□ -0.09
SSBP1-207ENST00000468267 MRPL22Q9NWU5 206 aaKnown RBP14.5□□□□□ -0.09
SSBP1-207ENST00000468267 TMEFF2Q9UIK5 374 aaPredicted RBP14.5□□□□□ -0.09
SSBP1-207ENST00000468267 AQP12BA6NM10 295 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 FAM157AC9JC47 383 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 PYCR1P32322 319 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 THBS2P35442 1172 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 TNFAIP6P98066 277 aaPredicted RBP14.49□□□□□ -0.09
SSBP1-207ENST00000468267 ECH1Q13011 328 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 GK3PQ14409 553 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 HLXQ14774 488 aaPredicted RBP14.49□□□□□ -0.09
SSBP1-207ENST00000468267 CD300LDQ6UXZ3 194 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 FBXW12Q6X9E4 464 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 Q6ZR03 302 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 AQP12AQ8IXF9 295 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 SLC37A3Q8NCC5 494 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 PROKR2Q8NFJ6 384 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 OR2T4Q8NH00 348 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 RAB1CQ92928 201 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 TIMD4Q96H15 378 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 PITX2Q99697 317 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 PTTG3PQ9NZH4 202 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 KCNG2Q9UJ96 466 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 BAIAP2Q9UQB8 552 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 WIPI2Q9Y4P8 454 aa14.49□□□□□ -0.09
SSBP1-207ENST00000468267 ARHGAP32A7KAX9 2087 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms