RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 UNQ6126/PRO20091Q6UXV3 157 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 SPATC1Q76KD6 591 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 KRT77Q7Z794 578 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.18□□□□□ -0.3
SNIP1-202ENST00000468040 ZNF786Q8N393 782 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 ZNF540Q8NDQ6 660 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 GGHQ92820 318 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 OR8B4Q96RC9 309 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 JAM3Q9BX67 310 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 NIPAL2Q9H841 368 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 RNF115Q9Y4L5 304 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 SPEF1Q9Y4P9 236 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 IGHV2OR16-5A0A0B4J2B6 119 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 APOC1P02654 83 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 CCL2P13500 99 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 HSD11B1P28845 292 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 PCSK6P29122 969 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 TPTEP56180 551 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 ACTA2P62736 377 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 ACTG2P63267 376 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 KRTAP27-1Q3LI81 207 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 SLC22A25Q6T423 547 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 LRRN1Q6UXK5 716 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 AHSA2Q719I0 299 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 ZNF679Q8IYX0 411 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 STX19Q8N4C7 294 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 SNX33Q8WV41 574 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 MYDGFQ969H8 173 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 TMEM80Q96HE8 168 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 KCNJ15Q99712 375 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 TMEM204Q9BSN7 226 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 FKBP14Q9NWM8 211 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 UBAP1Q9NZ09 502 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 EIF3KQ9UBQ5 218 aaKnown RBP13.17□□□□□ -0.3
SNIP1-202ENST00000468040 IKZF2Q9UKS7 526 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 DIMT1Q9UNQ2 313 aaKnown RBP13.17□□□□□ -0.3
SNIP1-202ENST00000468040 MYRFQ9Y2G1 1151 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 PCDHGB5Q9Y5G0 923 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 FASNP49327 2511 aaKnown RBP13.17□□□□□ -0.3
SNIP1-202ENST00000468040 COL12A1Q99715 3063 aa13.17□□□□□ -0.3
SNIP1-202ENST00000468040 ATP6V1G2-DDX39BF2Z307 99 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 F5H5K5 113 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 M0R135 149 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 ICMTO60725 284 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 SULT1C4O75897 302 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 ABHD16AO95870 558 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 KRT8P05787 483 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 DBHP09172 617 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 CRHBPP24387 322 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 COL8A1P27658 744 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 LOXP28300 417 aaPredicted RBP13.16□□□□□ -0.3
SNIP1-202ENST00000468040 CALCRP30988 508 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 OTX1P32242 354 aaPredicted RBP13.16□□□□□ -0.3
SNIP1-202ENST00000468040 DCTDP32321 178 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 RGS6P49758 472 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 ZNF85Q03923 595 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 SPOCK1Q08629 439 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 ST3GAL4Q11206 333 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 ADAM5Q6NVV9 412 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 DRAM2Q6UX65 266 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 PLEKHG7Q6ZR37 379 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 SSX6Q7RTT6 188 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 EGFL6Q8IUX8 553 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 PAQR4Q8N4S7 273 aaPredicted RBP13.16□□□□□ -0.3
SNIP1-202ENST00000468040 RFLNBQ8N5W9 214 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 SLC7A6Q92536 515 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 C14orf79Q96F83 325 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 ZNF799Q96GE5 643 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 C4orf45Q96LM5 186 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 RHNO1Q9BSD3 238 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 ELOVL3Q9HB03 270 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 CHCHD3Q9NX63 227 aaKnown RBP13.16□□□□□ -0.3
SNIP1-202ENST00000468040 ERVK13-1Q9NX77 482 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 SLCO1C1Q9NYB5 712 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 POU2F3Q9UKI9 436 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 LRCH1Q9Y2L9 728 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 EXOSC1Q9Y3B2 195 aaKnown RBP13.16□□□□□ -0.3
SNIP1-202ENST00000468040 LRP12Q9Y561 859 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 GCN1Q92616 2671 aaKnown RBP13.16□□□□□ -0.3
SNIP1-202ENST00000468040 ICE1Q9Y2F5 2266 aa13.16□□□□□ -0.3
SNIP1-202ENST00000468040 DOPEY2Q9Y3R5 2298 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 FAM221AA4D161 298 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 PTGES3LE9PB15 166 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 J3QW42 95 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 ACSM4P0C7M7 580 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 RAD52P43351 418 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 RIDAP52758 137 aaKnown RBP13.15□□□□□ -0.3
SNIP1-202ENST00000468040 SLC35A2P78381 396 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 GALEQ14376 348 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 RSPO1Q2MKA7 263 aaPredicted RBP13.15□□□□□ -0.3
SNIP1-202ENST00000468040 FAM220AQ7Z4H9 259 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 KCTD20Q7Z5Y7 419 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 C1orf174Q8IYL3 243 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 NUP37Q8NFH4 326 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 HS3ST6Q96QI5 342 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 DOK1Q99704 481 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 ALG8Q9BVK2 526 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 YTHDF1Q9BYJ9 559 aaKnown RBP13.15□□□□□ -0.3
SNIP1-202ENST00000468040 TTTY10Q9BZA0 68 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 DUSP21Q9H596 190 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms