RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TGM4P49221 684 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 NOVA1P51513 510 aaKnown RBP12.43□□□□□ -0.42
BRAT1-203ENST00000467558 MVDP53602 400 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 FCN2Q15485 313 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 CD226Q15762 336 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 OR51A2Q8NGJ7 313 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 SNX18Q96RF0 628 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 C20orf85Q9H1P6 137 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 BANF2Q9H503 90 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 TRAPPC2LQ9UL33 140 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 CCDC163A0A0D9SF12 145 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 HRKO00198 91 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 EFEMP2O95967 443 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 ATF4P18848 351 aaPredicted RBP12.43□□□□□ -0.42
BRAT1-203ENST00000467558 SRP9P49458 86 aaKnown RBP12.43□□□□□ -0.42
BRAT1-203ENST00000467558 ERVK-16P61578 105 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 DGCR2P98153 550 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 TIGD3Q6B0B8 471 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 LPCAT3Q6P1A2 487 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 CMTM4Q8IZR5 234 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 CADM3Q8N126 398 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 DYNLRB1Q9NP97 96 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 LHX9Q9NQ69 397 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 FLRT3Q9NZU0 649 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 DUSP13Q9UII6 198 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 ACTL6BO94805 426 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 CT45A8P0DMV1 189 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 CT45A9P0DMV2 189 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 GK2Q14410 553 aaPredicted RBP12.42□□□□□ -0.42
BRAT1-203ENST00000467558 PCK2Q16822 640 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 CT45A2Q5DJT8 189 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 VHLLQ6RSH7 139 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 PTPMT1Q8WUK0 201 aaPredicted RBP12.42□□□□□ -0.42
BRAT1-203ENST00000467558 SCARF2Q96GP6 870 aaPredicted RBP12.42□□□□□ -0.42
BRAT1-203ENST00000467558 RNF170Q96K19 258 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 PCDHGA5Q9Y5G8 931 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 ANK1P16157 1881 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 A0A1W2PPC1 479 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 TRIM64CA6NLI5 447 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 CD300LBA8K4G0 201 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 SLC33A1O00400 549 aaPredicted RBP12.42□□□□□ -0.42
BRAT1-203ENST00000467558 NXPH2O95156 264 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 PMS2P2O95744 297 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 C2orf76Q3KRA6 126 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 PRSS35Q8N3Z0 413 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 SLC7A6Q92536 515 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 MOGAT1Q96PD6 335 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 ADGRL4Q9HBW9 690 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 PMS2P1A4D2B8 440 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 CDKN2AP42771 156 aaKnown RBP12.42□□□□□ -0.42
BRAT1-203ENST00000467558 CRYBB2P43320 205 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 SSX1Q16384 188 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 WIPI1Q5MNZ9 446 aaPredicted RBP12.42□□□□□ -0.42
BRAT1-203ENST00000467558 PMS2CLQ68D20 193 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 ZAR1Q86SH2 424 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 WDR5BQ86VZ2 330 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 BHLHE23Q8NDY6 225 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 ROBO4Q8WZ75 1007 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 TSNAXQ99598 290 aaKnown RBP12.42□□□□□ -0.42
BRAT1-203ENST00000467558 OCSTAMPQ9BR26 566 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 GPR173Q9NS66 373 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 OCIAD1Q9NX40 245 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 B3GNT2Q9NY97 397 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 FABP7O15540 132 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 PNLIPP16233 465 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 EPHA1P21709 976 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 CAMLGP49069 296 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 STARD6P59095 220 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 OR1C1Q15619 314 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 CD276Q5ZPR3 534 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 DEGS2Q6QHC5 323 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 OR51S1Q8NGJ8 323 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 CD300LFQ8TDQ1 290 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 SPACA1Q9HBV2 294 aa12.42□□□□□ -0.42
BRAT1-203ENST00000467558 OR6C6A6NF89 314 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 XRCC2O43543 280 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 CSF3P09919 207 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 ELP2Q6IA86 826 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 SLC16A12Q6ZSM3 486 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 CCDC190Q86UF4 302 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 GLYATL2Q8WU03 294 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 SRRQ9GZT4 340 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 ZFP64Q9NPA5 681 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 IGHV5-10-1A0A0J9YXX1 117 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 SMCO3A2RU48 225 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 EIF4EP06730 217 aaKnown RBP12.41□□□□□ -0.42
BRAT1-203ENST00000467558 TPT1P13693 172 aaKnown RBP12.41□□□□□ -0.42
BRAT1-203ENST00000467558 ECI1P42126 302 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 GABRA2P47869 451 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 DYRK1AQ13627 763 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 ELFN2Q5R3F8 820 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 ATG4DQ86TL0 474 aaPredicted RBP12.41□□□□□ -0.42
BRAT1-203ENST00000467558 LILRB2Q8N423 598 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 OR11L1Q8NGX0 322 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 DERL3Q96Q80 235 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 RASL10BQ96S79 203 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 HAO2Q9NYQ3 351 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 LRP12Q9Y561 859 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 IL2RAP01589 272 aa12.41□□□□□ -0.42
BRAT1-203ENST00000467558 APOC3P02656 99 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms