RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 GAGE10A6NGK3 116 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 ANXA2P2A6NMY6 339 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 C17orf100A8MU93 164 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 E7ESA3 106 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 WNT9BO14905 357 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 ANKRD28O15084 1053 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 ATP5HO75947 161 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 KRT36O76013 467 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 CLPXO76031 633 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 H6PDO95479 791 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 SERPINA3P01011 423 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 PDYNP01213 254 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 IGHV2-5P01817 119 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 CRYBA1P05813 215 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 ENO1P06733 434 aaKnown RBP4.58□□□□□ -1.68
PTCD3-207ENST00000467273 PPIAL4GP0DN37 164 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 HOXB6P17509 224 aaKnown RBP4.58□□□□□ -1.68
PTCD3-207ENST00000467273 CD1BP29016 333 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 ARR3P36575 388 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 APOBEC1P41238 236 aaKnown RBP4.58□□□□□ -1.68
PTCD3-207ENST00000467273 ATP12AP54707 1039 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 MFAP4P55083 255 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 FOXG1P55316 489 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-207ENST00000467273 RAG2P55895 527 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 RPS23P62266 143 aaKnown RBP4.58□□□□□ -1.68
PTCD3-207ENST00000467273 H3F3AP84243 136 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 ACSM2AQ08AH3 577 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 DLG1Q12959 904 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 PDZK1IP1Q13113 114 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 FAM98BQ52LJ0 330 aaKnown RBP4.58□□□□□ -1.68
PTCD3-207ENST00000467273 KLHL26Q53HC5 615 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 TSPO2Q5TGU0 170 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 RUSC1-AS1Q66K80 236 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 ACSM2BQ68CK6 577 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 CARM1Q86X55 608 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 LRRC34Q8IZ02 419 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 CDK20Q8IZL9 346 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 BATF2Q8N1L9 274 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 ATP6V1C2Q8NEY4 427 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 C16orf78Q8WTQ4 265 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 OIT3Q8WWZ8 545 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 C22orf15Q8WYQ4 148 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 PIK3R3Q92569 461 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 NSMCE2Q96MF7 247 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 AMDHD1Q96NU7 426 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 WDFY2Q96P53 400 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 MS4A4EQ96PG1 132 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 FYTTD1Q96QD9 318 aaKnown RBP4.58□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF347Q96SE7 839 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 SLC30A2Q9BRI3 323 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 GATA5Q9BWX5 397 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-207ENST00000467273 RAB17Q9H0T7 212 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 GLIPR2Q9H4G4 154 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 RAD21L1Q9H4I0 556 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 NARFLQ9H6Q4 476 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 MIEF1Q9NQG6 463 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 FARSBQ9NSD9 589 aaKnown RBP4.58□□□□□ -1.68
PTCD3-207ENST00000467273 FAM118AQ9NWS6 357 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 ZDHHC2Q9UIJ5 367 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 PCTPQ9UKL6 214 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 GUCA1BQ9UMX6 200 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 FLVCR1Q9Y5Y0 555 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 WNK2Q9Y3S1 2297 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 DSPPQ9NZW4 1301 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 IGHV2OR16-5A0A0B4J2B6 119 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 MCIDASD6RGH6 385 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF587BE7ETH6 402 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 LGALS8O00214 317 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 RRHO14718 337 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 KLF11O14901 512 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF264O43296 627 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 TRAF3IP2O43734 574 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-207ENST00000467273 CRCPO75575 148 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 FOXH1O75593 365 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 KRT6AP02538 564 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 ACAA1P09110 424 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-207ENST00000467273 NHLRC4P0CG21 123 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-207ENST00000467273 CBR1P16152 277 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 SELEP16581 610 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 HOXB9P17482 250 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-207ENST00000467273 TSPAN8P19075 237 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 FUT1P19526 365 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 ATP6V1C1P21283 382 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 COL8A2P25067 703 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 IVDP26440 423 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 CALCRP30988 508 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 TIA1P31483 386 aaKnown RBP eCLIP4.57□□□□□ -1.687e-6■■■□□ 17.1
PTCD3-207ENST00000467273 GLRXP35754 106 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 FRKP42685 505 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-207ENST00000467273 CRYBB2P43320 205 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 CBX5P45973 191 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 UCP2P55851 309 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 POLR2GP62487 172 aaKnown RBP eCLIP4.57□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF763Q0D2J5 394 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 MAB21L1Q13394 359 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 IL18Q14116 193 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 IL13RA2Q14627 380 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 CASP8Q14790 479 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 SLC17A1Q14916 467 aa4.57□□□□□ -1.68
PTCD3-207ENST00000467273 QPRTQ15274 297 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms