RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 ZNF679Q8IYX0 411 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 SPARTQ8N0X7 666 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 ZNF283Q8N7M2 679 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 NANOGP1Q8N7R0 232 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 CPEB3Q8NE35 698 aaKnown RBP9.35□□□□□ -0.91
NUP188-204ENST00000467044 SSC4DQ8WTU2 575 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 SPTSSAQ969W0 71 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 MS4A3Q96HJ5 214 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 SIGLEC11Q96RL6 698 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 KCNJ15Q99712 375 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 COQ7Q99807 217 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 ZNF649Q9BS31 505 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 MND1Q9BWT6 205 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 PNRC2Q9NPJ4 139 aaKnown RBP9.35□□□□□ -0.91
NUP188-204ENST00000467044 MRM2Q9UI43 246 aaKnown RBP9.35□□□□□ -0.91
NUP188-204ENST00000467044 FBXL3Q9UKT7 428 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 LRP12Q9Y561 859 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 N6AMT1Q9Y5N5 214 aa9.35□□□□□ -0.91
NUP188-204ENST00000467044 HEATR1Q9H583 2144 aaKnown RBP9.35□□□□□ -0.91
NUP188-204ENST00000467044 SPTBN1Q01082 2364 aaKnown RBP9.34□□□□□ -0.91
NUP188-204ENST00000467044 TMEM129A0AVI4 362 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 C5orf49A4QMS7 147 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 OR6C6A6NF89 314 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 TUBAL3A6NHL2 446 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 SULT1C4O75897 302 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 MT-ND5P03915 603 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 SERPINA5P05154 406 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 THBDP07204 575 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 DBHP09172 617 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 RNF224P0DH78 156 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 COX5BP10606 129 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 ZNF14P17017 642 aaPredicted RBP9.34□□□□□ -0.91
NUP188-204ENST00000467044 PAX7P23759 505 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 STOMP27105 288 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 PSMB10P40306 273 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 SLC6A9P48067 706 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 GBX2P52951 348 aaPredicted RBP9.34□□□□□ -0.91
NUP188-204ENST00000467044 TPTEP56180 551 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 WNT4P56705 351 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 SORDQ00796 357 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 ROM1Q03395 351 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 EMX1Q04741 257 aaPredicted RBP9.34□□□□□ -0.91
NUP188-204ENST00000467044 SRSF1Q07955 248 aaKnown RBP eCLIP9.34□□□□□ -0.91
NUP188-204ENST00000467044 NEDD8Q15843 81 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 TBC1D28Q2M2D7 210 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 LIPNQ5VXI9 398 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 RNLSQ5VYX0 342 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 DEGS2Q6QHC5 323 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 KCTD8Q6ZWB6 473 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 RHOUQ7L0Q8 258 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 KLBQ86Z14 1044 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 ZNF584Q8IVC4 421 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 SYS1Q8N2H4 156 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 SLC30A7Q8NEW0 376 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 OR52N1Q8NH53 320 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 ZNF75AQ96N20 296 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 CDH20Q9HBT6 801 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 MOV10Q9HCE1 1003 aaKnown RBP9.34□□□□□ -0.91
NUP188-204ENST00000467044 VCX3AQ9NNX9 186 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 NGBQ9NPG2 151 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 BRD7Q9NPI1 651 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 ACOT13Q9NPJ3 140 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 NPDC1Q9NQX5 325 aaPredicted RBP9.34□□□□□ -0.91
NUP188-204ENST00000467044 DDX28Q9NUL7 540 aaKnown RBP9.34□□□□□ -0.91
NUP188-204ENST00000467044 ACOXLQ9NUZ1 547 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 GTF2A1LQ9UNN4 478 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 GRIP1Q9Y3R0 1128 aa9.34□□□□□ -0.91
NUP188-204ENST00000467044 LOC100509620A0A075B734 347 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 IGHV1-18A0A0C4DH31 117 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 TMEM269A0A1B0GVZ9 245 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 WIPF3A6NGB9 483 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 M0R135 149 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 CASKO14936 926 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 IGKV3-15P01624 115 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 LCKP06239 509 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 ANXA2P07355 339 aaKnown RBP9.33□□□□□ -0.92
NUP188-204ENST00000467044 CECR9P0C854 216 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 HSMCR30P0CW71 290 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 SLC2A1P11166 492 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 CX3CR1P49238 355 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 SPHARQ15513 63 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 TBCEQ15813 527 aaPredicted RBP9.33□□□□□ -0.92
NUP188-204ENST00000467044 ZNF684Q5T5D7 378 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 C1QTNF12Q5T7M4 302 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 SSX8Q7RTT4 187 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 NAA40Q86UY6 237 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 MYPOPQ86VE0 399 aaPredicted RBP9.33□□□□□ -0.92
NUP188-204ENST00000467044 OR1J2Q8NGS2 313 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 PELI1Q96FA3 418 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 ZNF799Q96GE5 643 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 OR5M11Q96RB7 305 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 KCNS3Q9BQ31 491 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 MRPS26Q9BYN8 205 aaKnown RBP9.33□□□□□ -0.92
NUP188-204ENST00000467044 NIPAL2Q9H841 368 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 BABAM2Q9NXR7 383 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 NPAP1Q9NZP6 1156 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 CRNNQ9UBG3 495 aaPredicted RBP9.33□□□□□ -0.92
NUP188-204ENST00000467044 RELNP78509 3460 aa9.33□□□□□ -0.92
NUP188-204ENST00000467044 PNMA8CA0A1B0GUJ8 204 aa9.32□□□□□ -0.92
NUP188-204ENST00000467044 PRSS44E7EML9 344 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms