RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 AKAP3O75969 853 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 OR2B3O76000 313 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ANXA9O76027 345 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 SNAI1O95863 264 aaPredicted RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 SLC16A8O95907 504 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 MT-ATP6P00846 226 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 IFNA7P01567 189 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 FGGP02679 453 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 C2P06681 752 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ERCC1P07992 297 aaPredicted RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 FCGR3AP08637 254 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 C8orf89P0DMQ9 161 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 GPX3P22352 226 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 GABRR1P24046 479 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 IL12BP29460 328 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 S100A11P31949 105 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 CD80P33681 288 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 EPHX2P34913 555 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ARR3P36575 388 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 RPS5P46782 204 aaKnown RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ACOT2P49753 483 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 XKP51811 444 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 FGF8P55075 233 aaPredicted RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 NME5P56597 212 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 TMEM33P57088 247 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 DEFA1P59665 94 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 DEFA3P59666 94 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 RAB2AP61019 212 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ERVS71-1P61550 626 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 RAP1AP62834 184 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 GTF2BQ00403 316 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 IL5RAQ01344 420 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 IFITM3Q01628 133 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 MYL5Q02045 173 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 GABPAQ06546 454 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 SIGLEC14Q08ET2 396 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ECH1Q13011 328 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ORC2Q13416 577 aaPredicted RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 GAMTQ14353 236 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 MEF2DQ14814 521 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 RPS6KA1Q15418 735 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 CHI3L2Q15782 390 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF630Q2M218 657 aaPredicted RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 BSXQ3C1V8 233 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ANKRD55Q3KP44 614 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 PARP15Q460N3 678 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 SBK1Q52WX2 424 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 AKIRIN2Q53H80 203 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 SPANXN2Q5MJ10 180 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 C6orf52Q5T4I8 152 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 DCAF12Q5T6F0 453 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ANKRD22Q5VYY1 191 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 CARD17Q5XLA6 110 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 FBXW9Q5XUX1 488 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 SCIMPQ6UWF3 145 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 BTNL3Q6UXE8 466 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 CLEC18BQ6UXF7 455 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 GCNT7Q6ZNI0 430 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 SLC35D2Q76EJ3 337 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 MRPL52Q86TS9 123 aaKnown RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 YRDCQ86U90 279 aaKnown RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 VRK2Q86Y07 508 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF573Q86YE8 665 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 SKA3Q8IX90 412 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ZFP82Q8N141 532 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ATPAF2Q8N5M1 289 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF283Q8N7M2 679 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 STXBP6Q8NFX7 210 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 OR10H4Q8NGA5 316 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 OR8J3Q8NGG0 315 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 RAB2BQ8WUD1 216 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 TCTEX1D2Q8WW35 142 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 TOP1MTQ969P6 601 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 PSMG2Q969U7 264 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 PNPLA2Q96AD5 504 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 CMTM5Q96DZ9 223 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 DCUN1D1Q96GG9 259 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 C16orf58Q96GQ5 468 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 CDKN2AIPNLQ96HQ2 116 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 HSFY1Q96LI6 401 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 MAGEB18Q96M61 343 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 COL21A1Q96P44 957 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 PANX1Q96RD7 426 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 SORT1Q99523 831 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 KLHDC3Q9BQ90 382 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 EBF4Q9BQW3 602 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 TTYH2Q9BSA4 534 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 TMEM208Q9BTX3 173 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 TMEM109Q9BVC6 243 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 DDA1Q9BW61 102 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ROGDIQ9GZN7 287 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 CXXC4Q9H2H0 198 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 AUNIPQ9H7T9 357 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 CXorf21Q9HAI6 301 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 AMBNQ9NP70 447 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ABCB9Q9NP78 766 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 TMEM138Q9NPI0 162 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 C14orf105Q9NVL8 296 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 TAS2R9Q9NYW1 312 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms