RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SPATA46Q5T0L3 261 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 ZNF691Q5VV52 312 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 RGS7BPQ6MZT1 257 aaPredicted RBP8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 CLEC2AQ6UVW9 174 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 CLEC9AQ6UXN8 241 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 LRP11Q86VZ4 500 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 CYB561A3Q8NBI2 242 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 CPEB3Q8NE35 698 aaKnown RBP8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 OR52E2Q8NGJ4 325 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 OR8D4Q8NGM9 314 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 OR1J1Q8NGS3 322 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 FBLIM1Q8WUP2 373 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 S100ZQ8WXG8 99 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 C12orf43Q96C57 262 aaKnown RBP8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 TSSK6Q9BXA6 273 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 OR2H1Q9GZK4 316 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 WNT5BQ9H1J7 359 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 BARX1Q9HBU1 254 aaPredicted RBP8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 DLL4Q9NR61 685 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 MYEF2Q9P2K5 600 aaKnown RBP8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 FKBP7Q9Y680 259 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 CDH10Q9Y6N8 788 aa8.39□□□□□ -1.07
RTFDC1-205ENST00000466260 IGHV4-30-2A0A087WSY4 118 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 ARRDC5A6NEK1 342 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 C12orf71A8MTZ7 269 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 H3BN98 237 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 H7C417 338 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 DCTN6O00399 190 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 SLC22A1O15245 554 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 HLA-DQA2P01906 255 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 ADRA2AP08913 450 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 GNAO1P09471 354 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 ZNF12P17014 697 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 GLRXP35754 106 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 HTR5AP47898 357 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 SMCPP49901 116 aaPredicted RBP8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 GDI2P50395 445 aaKnown RBP8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 RPS23P62266 143 aaKnown RBP8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 MOGQ16653 247 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 MICAQ29983 383 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 FAM27BQ5VT28 67 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 DNM1P34Q6PK57 102 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 FOXL2NBQ6ZUU3 175 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 DPPA2Q7Z7J5 298 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 TMEM179BQ7Z7N9 219 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 ADCK1Q86TW2 530 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 LINC00346Q8IVM7 164 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 HS3ST5Q8IZT8 346 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 LINC00528Q8N1L1 170 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 LINC00471Q8N535 108 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 MINDY2Q8NBR6 621 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 OR9Q1Q8NGQ5 310 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 OR1J2Q8NGS2 313 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 GIPC3Q8TF64 312 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 C11orf40Q8WZ69 217 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 RORBQ92753 470 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 MRPL24Q96A35 216 aaKnown RBP8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 COX4I2Q96KJ9 171 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 NIPSNAP1Q9BPW8 284 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 RHNO1Q9BSD3 238 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 C1orf198Q9H425 327 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 ZNF556Q9HAH1 456 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 KRT84Q9NSB2 600 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 PLEK2Q9NYT0 353 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 VSX1Q9NZR4 365 aaPredicted RBP8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 PDP1Q9P0J1 537 aaPredicted RBP8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 ASH2LQ9UBL3 628 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 ITPR3Q14573 2671 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 RTTNQ86VV8 2226 aa8.38□□□□□ -1.07
RTFDC1-205ENST00000466260 YLPM1P49750 1951 aaKnown RBP8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 LOC100509620A0A075B734 347 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 TMEM129A0AVI4 362 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 M0R233 179 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 SGCEO43556 437 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 LY6G6DO95868 133 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 TXNDC12O95881 172 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 POU1F1P28069 291 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 CRABP1P29762 137 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 PYCR1P32322 319 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 WNT5AP41221 380 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 EFNA4P52798 201 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 HMGA2P52926 109 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 PCBD1P61457 104 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 IL5RAQ01344 420 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 SCRN3Q0VDG4 424 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 EFNB3Q15768 340 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 NKPD1Q17RQ9 610 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 KDM4DQ6B0I6 523 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 ZNF770Q6IQ21 691 aaPredicted RBP8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 RPL13AP3Q6NVV1 102 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 CORO6Q6QEF8 472 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 RASSF6Q6ZTQ3 369 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 RFPL4BQ6ZWI9 263 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 GLB1L2Q8IW92 636 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 ZNF101Q8IZC7 436 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 OR6V1Q8N148 313 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 IQCF1Q8N6M8 205 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 ATG16L2Q8NAA4 619 aa8.37□□□□□ -1.07
RTFDC1-205ENST00000466260 OR10H5Q8NGA6 315 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms