RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 TMEM56-RWDD3S4R434 201 aa6.54□□□□□ -1.36
RPUSD3-212ENST00000466141 FLNAP21333 2647 aaKnown RBP6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 MAP1AP78559 2803 aaPredicted RBP6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 ELOVL7A1L3X0 281 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 NKX2-6A6NCS4 301 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 GJE1A6NN92 205 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 NPIPA5E9PKD4 350 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 SMLR1H3BR10 107 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 WWP2O00308 870 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 TP53I11O14683 189 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 KLF11O14901 512 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 UPK1BO75841 260 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 AIFM1O95831 613 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 SERPINA1P01009 418 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 LPLP06858 475 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 NR2F6P10588 404 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 HIST1H1BP16401 226 aaKnown RBP6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 IGFBP2P18065 325 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 FUT1P19526 365 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 GSTM3P21266 225 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 GNRHRP30968 328 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 ARRB2P32121 409 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 RPL14P50914 215 aaKnown RBP6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 AQP4P55087 323 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 RPL19P84098 196 aaKnown RBP6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 EMX2Q04743 252 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 NSDHLQ15738 373 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 TMEM249Q2WGJ8 235 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 IFI44LQ53G44 452 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 TTC23Q5W5X9 447 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 OR4C11Q6IEV9 310 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 Q6ZPB1 254 aaPredicted RBP6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 RNF165Q6ZSG1 346 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 LINGO2Q7L985 606 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 COMMD6Q7Z4G1 85 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 FAM220AQ7Z4H9 259 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 CLNKQ7Z7G1 428 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 S100A7AQ86SG5 101 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 LYG2Q86SG7 212 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 COMMD2Q86X83 199 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 PRIMA1Q86XR5 153 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 SPPL2CQ8IUH8 684 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 NRMQ8IXM6 262 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 ZNF595Q8IYB9 648 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 HS3ST5Q8IZT8 346 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 NECAP1Q8NC96 275 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 OR5J2Q8NH18 312 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 RNF133Q8WVZ7 376 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 RPL3LQ92901 407 aaKnown RBP6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 ANKRD9Q96BM1 317 aaPredicted RBP6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 OTUB1Q96FW1 271 aaPredicted RBP6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 HYLS1Q96M11 299 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 C3orf30Q96M34 536 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 GPR137Q96N19 417 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 COL21A1Q96P44 957 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 NODALQ96S42 347 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 NPAS2Q99743 824 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 FOXC2Q99958 501 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 PIGQQ9BRB3 760 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 VPS25Q9BRG1 176 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 THAP7Q9BT49 309 aaPredicted RBP6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 SRRQ9GZT4 340 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 TPT1P8Q9HAU6 139 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 IL1RL2Q9HB29 575 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 PRTFDC1Q9NRG1 225 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 C1orf109Q9NX04 203 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 GHRLQ9UBU3 117 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 PHF11Q9UIL8 331 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 ADAM29Q9UKF5 820 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 CBLCQ9ULV8 474 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 NPIPA1Q9UND3 350 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 MRPS33Q9Y291 106 aaKnown RBP6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 FBXO7Q9Y3I1 522 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 ZNF337Q9Y3M9 751 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 ATG4BQ9Y4P1 393 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 NUP214P35658 2090 aaPredicted RBP6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 NBEAL1Q6ZS30 2694 aa6.53□□□□□ -1.36
RPUSD3-212ENST00000466141 ABCA4P78363 2273 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 DNAJC13O75165 2243 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 AKAP6Q13023 2319 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 TRBV2A0A0J9YWF9 115 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 A0A1W2PR48 441 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 OR5H15A6NDH6 313 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 NKX6-3A6NJ46 265 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 FAM90A27PA6NNH2 459 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 M0R143 59 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 CLIC1O00299 241 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 OGG1O15527 345 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 FGF17O60258 216 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 SNNO75324 88 aaPredicted RBP6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 OR2J2O76002 312 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 KCNK2O95069 426 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 WNT11O96014 354 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 GBAP04062 536 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 SERPINE1P05121 402 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 UBCP0CG48 685 aaKnown RBP6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 ABOP16442 354 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 TNFRSF1AP19438 455 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 STOMP27105 288 aa6.52□□□□□ -1.37
RPUSD3-212ENST00000466141 HLA-DMAP28067 261 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms