RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 XPO6Q96QU8 1125 aaKnown RBP1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 OR5B12Q96R08 314 aa1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 BPIFA3Q9BQP9 254 aa1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 RSPO3Q9BXY4 272 aaPredicted RBP1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 ZYG11BQ9C0D3 744 aa1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 ACTR3CQ9C0K3 210 aaPredicted RBP1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 FAM192AQ9GZU8 254 aa1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 SPNS1Q9H2V7 528 aa1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 DDX19AQ9NUU7 478 aaKnown RBP1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 CLN6Q9NWW5 311 aa1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 GCNT4Q9P109 453 aa1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 CLN8Q9UBY8 286 aa1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 ZNF282Q9UDV7 671 aaPredicted RBP1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 WIF1Q9Y5W5 379 aa1.06□□□□□ -2.24
NUCKS1-202ENST00000464938 PLA2R1Q13018 1463 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 TRAV25A0A0B4J276 109 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 IGHV1OR15-9A0A0B4J2B8 117 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 A0A0J9YXV3 536 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 SMCO2A6NFE2 343 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 COLCA2A8K830 154 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 H7C417 338 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 RBFOX2O43251 390 aaKnown RBP eCLIP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 ERI3O43414 337 aaKnown RBP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 RAD51CO43502 376 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 HMMRO75330 724 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 REM1O75628 298 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 SEMA3DO95025 777 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 MPZL1O95297 269 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 HLA-DQA1P01909 254 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 APCSP02743 223 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 ARG1P05089 322 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 FGF4P08620 206 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 ERGP11308 486 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 GGT1P19440 569 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 RAB4AP20338 218 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 U2AF2P26368 475 aaKnown RBP eCLIP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 GTF2E2P29084 291 aaKnown RBP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 SSTR5P35346 364 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 OPRK1P41145 380 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 NBL1P41271 181 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 UQCRFS1P47985 274 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 CXCL12P48061 93 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 GFERP55789 205 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 CLDN18P56856 261 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 SYNJ2BPP57105 145 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 ZNF121P58317 390 aaPredicted RBP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 EIF3EP60228 445 aaKnown RBP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 UBE2NP61088 152 aaKnown RBP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 PPP1CBP62140 327 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 ILKQ13418 452 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 NCF4Q15080 339 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 KRTAP13-2Q52LG2 175 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 FBXW9Q5XUX1 488 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 TMEM53Q6P2H8 277 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 MBOAT1Q6ZNC8 495 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 MBOAT2Q6ZWT7 520 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 ABHD12BQ7Z5M8 362 aaPredicted RBP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 APRG1Q8IVJ8 170 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 OSR2Q8N2R0 312 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 METTL13Q8N6R0 699 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 COX18Q8N8Q8 333 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 TTC29Q8NA56 475 aaPredicted RBP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 CHST4Q8NCG5 386 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 OR52K2Q8NGK3 314 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 OR2L8Q8NGY9 312 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 OR52E5Q8NH55 327 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 COQ8AQ8NI60 647 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 FAM81AQ8TBF8 368 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 CIRBP-AS1Q8TBR5 109 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 RGP1Q92546 391 aaPredicted RBP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 PTX4Q96A99 478 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 EEF1AKMT3Q96AZ1 226 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 NEURL3Q96EH8 262 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 NRBF2Q96F24 287 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 OPALINQ96PE5 141 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 CAMK2N2Q96S95 79 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 TIMM17AQ99595 171 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 RNF5Q99942 180 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 C11orf70Q9BRQ4 267 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 MTG1Q9BT17 334 aaPredicted RBP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 OR52D1Q9H346 318 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 ELOVL6Q9H5J4 265 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 TMEM38AQ9H6F2 299 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 VPS37BQ9H9H4 285 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 LYRM4Q9HD34 91 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 RETNQ9HD89 108 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 SAMSN1Q9NSI8 373 aaKnown RBP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 C20orf96Q9NUD7 363 aaPredicted RBP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 PTTG3PQ9NZH4 202 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 CTSFQ9UBX1 484 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 MTFP1Q9UDX5 166 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 MARCOQ9UEW3 520 aaPredicted RBP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 RCL1Q9Y2P8 373 aaKnown RBP1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 PHLPP2Q6ZVD8 1323 aa1.05□□□□□ -2.24
NUCKS1-202ENST00000464938 IGHV3OR16-9A0A0B4J2B5 98 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 A0A1B0GW55 424 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 TSPAN11A1L157 253 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 PDZK1P1A8MUH7 402 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 H0YJW9 148 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 H7C0C1 242 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms