RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MARCH7Q9H992 704 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 PNRC2Q9NPJ4 139 aaKnown RBP12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 TBCCD1Q9NVR7 557 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 M0R129 80 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 NDUFS7O75251 213 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 IGHV4-39P01824 125 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 ANPEPP15144 967 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 PPOXP50336 477 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 PPP1CBP62140 327 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 RCN1Q15293 331 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 ZIK1Q3SY52 487 aaPredicted RBP12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 Q5PR19 223 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 RFPL4BQ6ZWI9 263 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 SHFQ7M4L6 423 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 DPY19L4Q7Z388 723 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 KRTAP1-3Q8IUG1 177 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 TIGD4Q8IY51 512 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 OR6N2Q8NGY6 317 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 SLC25A40Q8TBP6 338 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 TMEM163Q8TC26 289 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 IPCEF1Q8WWN9 437 aaPredicted RBP12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 MARS2Q96GW9 593 aaKnown RBP12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 IL4I1Q96RQ9 567 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 TEAD3Q99594 435 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 VRK1Q99986 396 aaPredicted RBP12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 OR2J1Q9GZK6 312 aa12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 BARX1Q9HBU1 254 aaPredicted RBP12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 H2AFY2Q9P0M6 372 aaPredicted RBP12.46□□□□□ -0.41
SQSTM1-205ENST00000464493 IGLV3-9A0A075B6K5 115 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 A0A1W2PPW3 197 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 F5H5K5 113 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 CLPTM1O96005 669 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 ADRA2AP08913 450 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 TUBG1P23258 451 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 GCH1P30793 250 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 RGS6P49758 472 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 KLF3P57682 345 aaPredicted RBP12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 CDC42P60953 191 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 EIF2B1Q14232 305 aaKnown RBP12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 KRTAP27-1Q3LI81 207 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 SPATA46Q5T0L3 261 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 AADACL4Q5VUY2 407 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 NXNL2Q5VZ03 156 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 MEPCEQ7L2J0 689 aaKnown RBP12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 BCDIN3DQ7Z5W3 292 aaKnown RBP12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 WFDC11Q8NEX6 87 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 OR10S1Q8NGN2 331 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 KLF14Q8TD94 323 aaPredicted RBP12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 ST7LQ8TDW4 575 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 SPTSSAQ969W0 71 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 SLAMF6Q96DU3 332 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 HRASLS5Q96KN8 279 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 COG8Q96MW5 612 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 DYNLRB1Q9NP97 96 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 TUBG2Q9NRH3 451 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 CENPMQ9NSP4 180 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 DDX28Q9NUL7 540 aaKnown RBP12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 SLCO1C1Q9NYB5 712 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 MYEF2Q9P2K5 600 aaKnown RBP12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 GPR160Q9UJ42 338 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 STARD10Q9Y365 291 aa12.45□□□□□ -0.42
SQSTM1-205ENST00000464493 CCDC182A6NF36 153 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 J3QW42 95 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 M0R233 179 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 SELENOFO60613 162 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 F12P00748 615 aaPredicted RBP12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 IGHV3-13P01766 116 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 ACSM4P0C7M7 580 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 ALDH3B1P43353 468 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 EFNA4P52798 201 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 TPTEP56180 551 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 TAF13Q15543 124 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 TRIP10Q15642 601 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 MOGQ16653 247 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 LCN1P1Q5VSP4 162 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 MBNL2Q5VZF2 373 aaKnown RBP12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 TGIF2LYQ8IUE0 185 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 ZCCHC24Q8N2G6 241 aaKnown RBP12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 OR5L1Q8NGL2 311 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 OR8J1Q8NGP2 316 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 TRUB1Q8WWH5 349 aaKnown RBP12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 APOBEC3DQ96AK3 386 aaPredicted RBP12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 ABHD6Q9BV23 337 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 RAB1BQ9H0U4 201 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 MS4A5Q9H3V2 200 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 TOR3AQ9H497 397 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 TAAR3PQ9P1P4 343 aa12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 ZNF469Q96JG9 3925 aaPredicted RBP12.44□□□□□ -0.42
SQSTM1-205ENST00000464493 SLC22A31A6NKX4 558 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 ZNF878C9JN71 531 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 E9PQ18 207 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 H3BSA7 217 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 SSX4O60224 188 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 ERCC1P07992 297 aaPredicted RBP12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 MPV17P39210 176 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 NAA10P41227 235 aaPredicted RBP12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 SLC15A1P46059 708 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 NUDT6P53370 316 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 ELF3P78545 371 aaPredicted RBP12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 MAD2L1BPQ15013 274 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms