RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 TBC1D24Q9ULP9 559 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 SAR1BQ9Y6B6 198 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 MYO10Q9HD67 2058 aa2.49□□□□□ -2.01
CLK1-208ENST00000464454 IGKV2-28A0A075B6P5 120 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 TEX46H3BTG2 121 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 BET1O15155 118 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 IGKV2D-28P01615 120 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 HBE1P02100 147 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 CISD3P0C7P0 127 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 DTYMKP23919 212 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 SSTR5P35346 364 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 PPP1CBP62140 327 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 ILKQ13418 452 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 ITIH4Q14624 930 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 BEX5Q5H9J7 111 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 FAM78AQ5JUQ0 283 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 PRMT9Q6P2P2 845 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 Q6ZR03 302 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 RIMKLAQ8IXN7 391 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 KATNAL2Q8IYT4 538 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 OR10AD1Q8NGE0 317 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 OR6Q1Q8NGQ2 317 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 COQ8AQ8NI60 647 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 PIFOQ8TCI5 191 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 JSRP1Q96MG2 331 aaPredicted RBP2.48□□□□□ -2.01
CLK1-208ENST00000464454 ZNF382Q96SR6 550 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 TIMM17AQ99595 171 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 CLSTN2Q9H4D0 955 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 TMEM38AQ9H6F2 299 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 ZNF430Q9H8G1 570 aaPredicted RBP2.48□□□□□ -2.01
CLK1-208ENST00000464454 BEX1Q9HBH7 125 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 MRPL22Q9NWU5 206 aaKnown RBP2.48□□□□□ -2.01
CLK1-208ENST00000464454 HYOU1Q9Y4L1 999 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 YTHDF2Q9Y5A9 579 aaKnown RBP2.48□□□□□ -2.01
CLK1-208ENST00000464454 TMEM14AQ9Y6G1 99 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 ADAMTS13Q76LX8 1427 aa2.48□□□□□ -2.01
CLK1-208ENST00000464454 UBN2Q6ZU65 1347 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 WDR19Q8NEZ3 1342 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 TRAV25A0A0B4J276 109 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 A6NDN8 102 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 GOLGA8TH3BQL2 631 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 L7N2F9 121 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 SLC9A3R1O14745 358 aaPredicted RBP2.47□□□□□ -2.01
CLK1-208ENST00000464454 VAMP5O95183 116 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 HLA-HP01893 362 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 ASGR1P07306 291 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 CTRB1P17538 263 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 SLC1A2P43004 574 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 LINC00315P59091 139 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 LOXL1Q08397 574 aaPredicted RBP2.47□□□□□ -2.01
CLK1-208ENST00000464454 SYCNQ0VAF6 134 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 EIF4EBP1Q13541 118 aaPredicted RBP2.47□□□□□ -2.01
CLK1-208ENST00000464454 KIR2DS1Q14954 304 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 NCF4Q15080 339 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 STK11Q15831 433 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 AVPI1Q5T686 147 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 FBXW9Q5XUX1 488 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 ANGPTL8Q6UXH0 198 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 C12orf54Q6X4T0 127 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 NTM-AS1Q6ZSK4 140 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 OTUD6AQ7L8S5 288 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 CALHM1Q8IU99 346 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 UBALD2Q8IYN6 164 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 FAM71AQ8IYT1 594 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 COX18Q8N8Q8 333 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 SNX31Q8N9S9 440 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 OR51E1Q8TCB6 317 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 AGR3Q8TD06 166 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 C15orf40Q8WUR7 153 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 COL21A1Q96P44 957 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 CAMK2N2Q96S95 79 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 FOXC2Q99958 501 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 SLC7A5P2Q9GIP4 190 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 PIGUQ9H490 435 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 NCOR1P1Q9H4R4 102 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 EDA2RQ9HAV5 297 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 CLN6Q9NWW5 311 aa2.47□□□□□ -2.01
CLK1-208ENST00000464454 PDP1Q9P0J1 537 aaPredicted RBP2.47□□□□□ -2.01
CLK1-208ENST00000464454 COL4A4P53420 1690 aaPredicted RBP2.47□□□□□ -2.01
CLK1-208ENST00000464454 IGSF9BQ9UPX0 1349 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 FHOD3Q2V2M9 1422 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 TSPAN11A1L157 253 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 NCBP2LA6PVI3 153 aaKnown RBP2.46□□□□□ -2.02
CLK1-208ENST00000464454 SUPT3HB4E1H0 165 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 H0YIV9 168 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 H7C417 338 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 K7EMT4 169 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 FCN3O75636 299 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 SEMA3DO95025 777 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 YIF1AO95070 293 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 WISP3O95389 354 aaPredicted RBP2.46□□□□□ -2.02
CLK1-208ENST00000464454 HPRT1P00492 218 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 CTSLP07711 333 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 MRPL3P09001 348 aaKnown RBP2.46□□□□□ -2.02
CLK1-208ENST00000464454 RHOXF2BP0C7M4 288 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 UBCP0CG48 685 aaKnown RBP2.46□□□□□ -2.02
CLK1-208ENST00000464454 CSNK2A2P19784 350 aaPredicted RBP2.46□□□□□ -2.02
CLK1-208ENST00000464454 IL32P24001 234 aa2.46□□□□□ -2.02
CLK1-208ENST00000464454 RPS23P62266 143 aaKnown RBP2.46□□□□□ -2.02
CLK1-208ENST00000464454 PRR3P79522 188 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms