RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 TFGQ92734 400 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 MUCL1Q96DR8 90 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 MYEOVQ96EZ4 313 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 HMCESQ96FZ2 354 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SDSLQ96GA7 329 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 LIN37Q96GY3 246 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 CIB3Q96Q77 187 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SLC6A7Q99884 636 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 WWTR1Q9GZV5 400 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 DPEP2Q9H4A9 486 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SYNPO2LQ9H987 977 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 FBRSQ9HAH7 460 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TM7SF3Q9NS93 570 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TREX1Q9NSU2 369 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM100Q9NV29 134 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 POLR3KQ9Y2Y1 108 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 SIRT4Q9Y6E7 314 aaPredicted RBP3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TRBC2A0A5B9 178 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 XKRY2A2RUG3 117 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 A6NIZ1 184 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TRDCB7Z8K6 153 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 GABARAPH6UMI1 98 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 PIRO00625 290 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 XKRYO14609 159 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 NPC1O15118 1278 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 B4GALT5O43286 388 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SCN2BO60939 215 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ERAL1O75616 437 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 RPP40O75818 363 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 C1QL1O75973 258 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 GLSO94925 669 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 KLF8O95600 359 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 DDAH2O95865 285 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 EOMESO95936 686 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 EDN1P05305 212 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 EPHX1P07099 455 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 UMODP07911 640 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 FCGR3AP08637 254 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SLC35G6P0C7Q6 338 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 GTF2F2P13984 249 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 COX7A2P14406 83 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 HOXB2P14652 356 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 MAKP20794 623 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 MAOAP21397 527 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 MC5RP33032 325 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 FAUP35544 74 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TAF6P49848 677 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 NPY4RP50391 375 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SLC16A1P53985 500 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TAS2R41P59536 307 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ST3GAL3Q11203 375 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 FZD5Q13467 585 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CBFBQ13951 182 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 MIDNQ504T8 468 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 KRTCAP3Q53RY4 240 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 C1orf194Q5T5A4 169 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TPTE2P1Q5T6R2 138 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 C12orf73Q69YU5 71 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 GRHL2Q6ISB3 625 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 FCRLAQ7L513 359 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 GRINAQ7Z429 371 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ACOT1Q86TX2 421 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 RTN4RL1Q86UN2 441 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM183AQ8IXX5 376 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 DEFB106AQ8N104 65 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 C17orf78Q8N4C9 275 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 FAM89BQ8N5H3 189 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 RNF149Q8NC42 400 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 OR4C16Q8NGL9 310 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 RHEBL1Q8TAI7 183 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 PINX1Q96BK5 328 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 APOLD1Q96LR9 279 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 OR6C1Q96RD1 312 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TBX15Q96SF7 602 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 GINS3Q9BRX5 216 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 MEGF9Q9H1U4 602 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 P2RY12Q9H244 342 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CST9LQ9H4G1 147 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 APMAPQ9HDC9 416 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 MKKSQ9NPJ1 570 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 PLSCR4Q9NRQ2 329 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF701Q9NV72 531 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CLDND1Q9NY35 253 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SLC2A8Q9NY64 477 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 FBXW11Q9UKB1 542 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 PITPNC1Q9UKF7 332 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SLC7A7Q9UM01 511 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 KCNK6Q9Y257 313 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 MRPS2Q9Y399 296 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TMED3Q9Y3Q3 217 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 A0A0G2JK05 382 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ZC3H12DA2A288 527 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 FAM157AC9JC47 383 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 J3KRW8 73 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 GSTZ1O43708 216 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 NME6O75414 186 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 NDUFB8O95169 186 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 GPANK1O95872 356 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 IFNA21P01568 189 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TRBC1P01850 177 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms