RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ZNF19P17023 458 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 ECH1Q13011 328 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 SPHARQ15513 63 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 TAB1Q15750 504 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 LIPNQ5VXI9 398 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 TMEM53Q6P2H8 277 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 FDX2Q6P4F2 183 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 TMPRSS11AQ6ZMR5 421 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 KRT77Q7Z794 578 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 OR1F12Q8NHA8 337 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 GATAD2BQ8WXI9 593 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 NANOS1Q8WY41 292 aaKnown RBP12.48□□□□□ -0.41
COL6A1-202ENST00000463060 HSD17B8Q92506 261 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 MUL1Q969V5 352 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 MRPL48Q96GC5 212 aaKnown RBP12.48□□□□□ -0.41
COL6A1-202ENST00000463060 COG8Q96MW5 612 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 MYCBPQ99417 103 aaPredicted RBP12.48□□□□□ -0.41
COL6A1-202ENST00000463060 ATF6BQ99941 703 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 ACTR6Q9GZN1 396 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 RNF121Q9H920 327 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 CENPMQ9NSP4 180 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 PLEK2Q9NYT0 353 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 FLNCQ14315 2725 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 HCFC1P51610 2035 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 CLEC18AA5D8T8 446 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 CLDN14O95500 239 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 CLPTM1O96005 669 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 PNPP00491 289 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 KRT8P05787 483 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 THBDP07204 575 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 TACSTD2P09758 323 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 H2BFMP0C1H6 154 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 PAX7P23759 505 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 GRNP28799 593 aaKnown RBP12.47□□□□□ -0.41
COL6A1-202ENST00000463060 ALDH3B2P48448 385 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 UBE2NP61088 152 aaKnown RBP12.47□□□□□ -0.41
COL6A1-202ENST00000463060 RAB39AQ14964 217 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 C3orf36Q3SXR2 165 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 SYT6Q5T7P8 510 aaPredicted RBP12.47□□□□□ -0.41
COL6A1-202ENST00000463060 CLEC18BQ6UXF7 455 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 SPATC1Q76KD6 591 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 PRSS45Q7RTY3 260 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 CLEC18CQ8NCF0 446 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 RPS4Y2Q8TD47 263 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 SLC7A6Q92536 515 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 FCGR1BQ92637 280 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 RORBQ92753 470 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 POM121L2Q96KW2 1035 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 KCNJ15Q99712 375 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 MROQ9BYG7 248 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 NIPAL2Q9H841 368 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 ACOXLQ9NUZ1 547 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 ST6GALNAC2Q9UJ37 374 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 IKZF2Q9UKS7 526 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 FBXL3Q9UKT7 428 aa12.47□□□□□ -0.41
COL6A1-202ENST00000463060 SIRT4Q9Y6E7 314 aaPredicted RBP12.47□□□□□ -0.41
COL6A1-202ENST00000463060 SETXQ7Z333 2677 aaKnown RBP12.47□□□□□ -0.41
COL6A1-202ENST00000463060 PYCARD-AS1I3L0S3 204 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 MYL12BO14950 172 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 OGG1O15527 345 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 DOK2O60496 412 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 INMTO95050 263 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 AGFG2O95081 481 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 DBHP09172 617 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 PPP3CBP16298 524 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 APEX1P27695 318 aaKnown RBP12.46□□□□□ -0.41
COL6A1-202ENST00000463060 CAPZA2P47755 286 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 MMP16P51512 607 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 RIDAP52758 137 aaKnown RBP12.46□□□□□ -0.41
COL6A1-202ENST00000463060 GP2P55259 537 aaKnown RBP12.46□□□□□ -0.41
COL6A1-202ENST00000463060 GRB2P62993 217 aaKnown RBP12.46□□□□□ -0.41
COL6A1-202ENST00000463060 SORDQ00796 357 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 BDH1Q02338 343 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 TPBGQ13641 420 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 ZNF367Q7RTV3 350 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 MYPOPQ86VE0 399 aaPredicted RBP12.46□□□□□ -0.41
COL6A1-202ENST00000463060 KLBQ86Z14 1044 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 ALDH16A1Q8IZ83 802 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 YIPF7Q8N8F6 280 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 MS4A3Q96HJ5 214 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 MGLLQ99685 303 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 MOV10Q9HCE1 1003 aaKnown RBP12.46□□□□□ -0.41
COL6A1-202ENST00000463060 NPAP1Q9NZP6 1156 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 GNG8Q9UK08 70 aa12.46□□□□□ -0.41
COL6A1-202ENST00000463060 ADGRG4Q8IZF6 3080 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 ICMTO60725 284 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 CELA3BP08861 270 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 ACSM4P0C7M7 580 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 PLA2G2AP14555 144 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 ANOS1P23352 680 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 PSMB10P40306 273 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 TGM4P49221 684 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 GTF2A1P52655 376 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-202ENST00000463060 GBX2P52951 348 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-202ENST00000463060 NANOS3P60323 173 aaKnown RBP12.45□□□□□ -0.42
COL6A1-202ENST00000463060 HGFACQ04756 655 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 PLP2Q04941 152 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 MRPL28Q13084 256 aaKnown RBP12.45□□□□□ -0.42
COL6A1-202ENST00000463060 PPA1Q15181 289 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 MED22Q15528 200 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms