RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 COL13A1Q5TAT6 717 aaPredicted RBP10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 LPCAT3Q6P1A2 487 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 PAQR4Q8N4S7 273 aaPredicted RBP10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 THAP6Q8TBB0 222 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 ELP5Q8TE02 316 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 PTPMT1Q8WUK0 201 aaPredicted RBP10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 RRNAD1Q96FB5 475 aaKnown RBP10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 MAP3K3Q99759 626 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 OR11A1Q9GZK7 315 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 TLNRD1Q9H1K6 362 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 CNTD2Q9H8S5 307 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 MLXQ9UH92 298 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 SHPKQ9UHJ6 478 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 CSAG2Q9Y5P2 127 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 TTLL8A6PVC2 850 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 HSPB2A8KAH6 182 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 B4DGG1 531 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 RAB27BO00194 218 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 EIF1AYO14602 144 aaKnown RBP10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 SRSF10O75494 262 aaKnown RBP10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 STK17BO94768 372 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 H2AFB1P0C5Y9 115 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 GNB3P16520 340 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 NPBWR1P48145 328 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 HSPB2Q16082 182 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 OR4A4PQ8NGN8 299 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 OR2I1PQ8NGU4 316 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 GPBAR1Q8TDU6 330 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 C2CD4CQ8TF44 421 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 MITD1Q8WV92 249 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 AQP3Q92482 292 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 TSLPQ969D9 159 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 PHYHIPLQ96FC7 376 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 CCNL2Q96S94 520 aaPredicted RBP10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 G6PC2Q9NQR9 355 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 ARID1AO14497 2285 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 C5orf51A6NDU8 294 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 F8W036 122 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 TNFRSF10CO14798 259 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 IL2RAP01589 272 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 PMP2P02689 132 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 FSTP19883 344 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 TNFRSF4P43489 277 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 PNLIPRP2P54317 469 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 BLOC1S1P78537 153 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 ROM1Q03395 351 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 SCRN3Q0VDG4 424 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 CCINQ13939 588 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 PTCRAQ6ISU1 281 aaPredicted RBP10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 ARMC6Q6NXE6 501 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 INO80EQ8NBZ0 244 aaPredicted RBP10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 OR52N5Q8NH56 324 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 TMED6Q8WW62 240 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 ASB17Q8WXJ9 295 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 DCUN1D4Q92564 292 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 ZNF587Q96SQ5 575 aaPredicted RBP10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 PTGES2Q9H7Z7 377 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 NDRG3Q9UGV2 375 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 SLC5A6Q9Y289 635 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 SLCO1B1Q9Y6L6 691 aa10.5□□□□□ -0.73
PDZRN3-203ENST00000462146 TMEM200CA6NKL6 621 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 ZNF208O43345 1280 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 OR2T1O43869 369 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 SERPINF1P36955 418 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 ZFP82Q8N141 532 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 SVBPQ8N300 66 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 FOXRED1Q96CU9 486 aaPredicted RBP10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 PIK3IP1Q96FE7 263 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 C12orf57Q99622 126 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 PHB2Q99623 299 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 SLC7A5P2Q9GIP4 190 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 S1PR5Q9H228 398 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 PRODH2Q9UF12 536 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 MKL2Q9ULH7 1088 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 WDFY3Q8IZQ1 3526 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 TRAV36DV7A0A075B6V5 113 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 IGKV1D-43A0A0B4J1Z2 117 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 MSGN1A6NI15 193 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 LINC01565O15544 149 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 FGF16O43320 207 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 TNFP01375 233 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 PVALBP20472 110 aaPredicted RBP10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 PPICP45877 212 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 KCTD18Q6PI47 426 aaPredicted RBP10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 TMEM92Q6UXU6 159 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 ZNF813Q6ZN06 617 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 DCXRQ7Z4W1 244 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 TMEM200AQ86VY9 491 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 LYPD6Q86Y78 171 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 CCDC36Q8IYA8 594 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 GTPBP8Q8N3Z3 284 aaPredicted RBP10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 OR52N4Q8NGI2 321 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 MARCH1Q8TCQ1 289 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 PRRT1Q99946 306 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 FOXQ1Q9C009 403 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 SLCO5A1Q9H2Y9 848 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 CHMP1AQ9HD42 196 aaPredicted RBP10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 OR52A1Q9UKL2 312 aa10.49□□□□□ -0.73
PDZRN3-203ENST00000462146 HHLA2Q9UM44 414 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms