RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 PNRC2Q9NPJ4 139 aaKnown RBP10.05□□□□□ -0.8
TRAF3IP1-204ENST00000462122 TUBG2Q9NRH3 451 aa10.05□□□□□ -0.8
TRAF3IP1-204ENST00000462122 TBCCD1Q9NVR7 557 aa10.05□□□□□ -0.8
TRAF3IP1-204ENST00000462122 FAM118AQ9NWS6 357 aa10.05□□□□□ -0.8
TRAF3IP1-204ENST00000462122 CCDC168Q8NDH2 2452 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 ZNF878C9JN71 531 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 H3BSA7 217 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 OVOL3O00110 214 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 SLC16A6O15403 523 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 MPZL2O60487 215 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 SELENOFO60613 162 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 CD8AP01732 235 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 LCKP06239 509 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 PSKH1P11801 424 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 PAX1P15863 534 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 HTR1FP30939 366 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 SLC15A1P46059 708 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 EVX1P49640 407 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 NUDT6P53370 316 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 SELENOVP59797 346 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 SNRPGP62308 76 aaKnown RBP10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 POU4F2Q12837 409 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 TMED1Q13445 227 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 EIF2B1Q14232 305 aaKnown RBP10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 SWI5Q1ZZU3 235 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 KRTAP27-1Q3LI81 207 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 SLC25A30Q5SVS4 291 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 MEDAGQ5VYS4 303 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 RHOUQ7L0Q8 258 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 SLC16A9Q7RTY1 509 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 ZNF101Q8IZC7 436 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 LRRC75A-AS1Q8N1F1 130 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 OR10S1Q8NGN2 331 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 OR1J1Q8NGS3 322 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 OTOSQ8NHW6 89 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 ABHD4Q8TB40 342 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 ST7LQ8TDW4 575 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 SPTSSAQ969W0 71 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 SLAMF6Q96DU3 332 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 CNN2Q99439 309 aaKnown RBP10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 FOXC2Q99958 501 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 COPS4Q9BT78 406 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 YIPF3Q9GZM5 350 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 PLK3Q9H4B4 646 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 HAO2Q9NYQ3 351 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 NKX1-2Q9UD57 310 aaPredicted RBP10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 WARS2Q9UGM6 360 aaKnown RBP10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 TMEM14AQ9Y6G1 99 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 PMF1-BGLAPU3KQ54 211 aa10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 HEATR1Q9H583 2144 aaKnown RBP10.04□□□□□ -0.8
TRAF3IP1-204ENST00000462122 SNTNA6NMZ2 147 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 F5H5K5 113 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 DLGAP1O14490 977 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 LYNP07948 512 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 DBHP09172 617 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 ZNF250P15622 560 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 OTX1P32242 354 aaPredicted RBP10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 NAA10P41227 235 aaPredicted RBP10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 TPTEP56180 551 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 PPP1CBP62140 327 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 GRB2P62993 217 aaKnown RBP10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 MST1LQ2TV78 715 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 TTC23Q5W5X9 447 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 RFPL4BQ6ZWI9 263 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 BCDIN3DQ7Z5W3 292 aaKnown RBP10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 OR5L1Q8NGL2 311 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 RNF133Q8WVZ7 376 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 SLC7A6Q92536 515 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 APOBEC3DQ96AK3 386 aaPredicted RBP10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 TRMT61AQ96FX7 289 aaKnown RBP10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 ZNF582Q96NG8 517 aaPredicted RBP10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 MNTQ99583 582 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 APOL4Q9BPW4 351 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 ABHD6Q9BV23 337 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 CACNG6Q9BXT2 260 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 MRPL37Q9BZE1 423 aaKnown RBP10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 GSX2Q9BZM3 304 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 OR51B6Q9H340 312 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 ZNF701Q9NV72 531 aaPredicted RBP10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 LAMP5Q9UJQ1 280 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 GRIP1Q9Y3R0 1128 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 OTOGQ6ZRI0 2925 aa10.03□□□□□ -0.8
TRAF3IP1-204ENST00000462122 IGLV3-9A0A075B6K5 115 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 H7C417 338 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 M0R135 149 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 PHYHO14832 338 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 NGFP01138 241 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 APOC1P02654 83 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 MRPL3P09001 348 aaKnown RBP10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ACSM4P0C7M7 580 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 HSD11B1P28845 292 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 GCH1P30793 250 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 PPOXP50336 477 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 KLF3P57682 345 aaPredicted RBP10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 ERVS71-1P61550 626 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 RIPK1Q13546 671 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 TAF13Q15543 124 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 OCLNQ16625 522 aa10.02□□□□□ -0.81
TRAF3IP1-204ENST00000462122 MOGQ16653 247 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms